Bufo gargarizans (Asiatic toad): 122945163
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Entry
122945163 CDS
T07965
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar04510
Focal adhesion
bgar04512
ECM-receptor interaction
bgar04518
Integrin signaling
bgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122945163 (COL6A2)
04518 Integrin signaling
122945163 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122945163 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122945163 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bgar04147
]
122945163 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
bgar00536
]
122945163 (COL6A2)
Exosome [BR:
bgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122945163 (COL6A2)
Glycosaminoglycan binding proteins [BR:
bgar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122945163 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
122945163 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
WHD_GTF3C1
Motif
Other DBs
NCBI-GeneID:
122945163
NCBI-ProteinID:
XP_044160026
LinkDB
All DBs
Position
8:47369084..47410418
Genome browser
AA seq
664 aa
AA seq
DB search
MAQLRMLCLLLSIAFGSISAQNDEIKTCEDKAKCPINVYFIIDTSESIILQTAPIQSLLD
HMKRFIPAFLAKLENEAYLDQVYMNWQYGGLHYSDEVQIFSQLTTDKNEYISKLRGVQYI
GRGTFTDCAISNMTAQIKAQMQNQVGQGGREPVNFAVVITDGHVTGNPCGGVKTQADRAQ
LAGIKLFSVAASRDVYESGLREIANMPHELFRNAYSVTRPDDQTEIDQRTIDKIIQVMKH
EAYGECYRLSCLAISGPPGLHGQRGQKGAKGNAGEPGDLGLKGRQGDPGIEGPIGYPGPK
GVPGAKGEKGDFGADGRKGIPGIYGRNGTDGQKGKTGRIGAPGCKGDPGDKGPEGYPGDA
GDRGEDGDRGIKGDPGRPGSSGLPGSFGEKGNKGPAGNLGAPGSPGVKGNKGGPGIQGPK
GEPGRRGDSGTKGSAGTDGPKGEKGDPGPEGPRGLGGEAGVKGAKGDRGAPGPRGVQGPA
GVPGRNGSRGDPGDMGERGNPGPAGPKGDRGRPGISYPGPRGPSGDKGEKGFPGPQGGRG
DFGLKGAAGPKGENGESGDPGPVGEPGPRGPTGGSGLQGDLGPSGDPALTECDVMTYVRE
TCGCCDCEKRCGALDIVFIIDSSESIGYTNFTLEKNFVINVVSKLGSIAKDPKADIGKLY
FFMD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctacgaatgctgtgtttgctgctctccattgccttcggctctatatcagca
cagaatgatgaaataaagacgtgtgaagacaaggccaaatgtcccatcaatgtgtacttc
atcattgacacatctgagagtataatccttcagaccgctcccatccagagcttgttggat
cacatgaagagatttattcctgctttcctggcaaagctagagaatgaggcctacctagat
caggtctatatgaactggcaatatggaggtctacattactcagatgaagtccagatcttc
agccagctcaccactgacaagaatgaatacatttcgaaactacgaggagtccagtacatt
ggccgaggcacctttacagactgcgccatctctaacatgaccgctcagataaaggcgcag
atgcagaaccaggttgggcaaggaggacgtgaacctgtgaatttcgctgtggtgatcact
gatggccatgtaactggtaatccatgtggaggagtgaagacacaggcagacagagcacag
ctcgccggtatcaagcttttctcagtagctgccagtcgcgatgtttatgaatctggcctt
cgtgagattgctaacatgccacatgagctcttcaggaatgcttactcagtgaccagacct
gatgaccaaaccgagattgatcagagaaccatcgataaaatcattcaagttatgaaacac
gaggcttatggagagtgctacagattgagctgcctggcgatttcgggacctcctggtctg
catggtcagagaggacagaagggtgccaaaggtaatgctggtgaacctggagatcttggt
ctgaaaggacggcagggagatcctggaattgagggaccaattggatatcctggacccaag
ggtgttcctggtgctaaaggagaaaagggagattttggtgcagatggaaggaagggcata
cccgggatttatggaagaaatggtacagatgggcagaagggcaagacaggtcggattggt
gctcctggatgtaaaggagatcctggagataagggtcctgaaggctatccaggagatgca
ggagacagaggagaagatggagaccgtggaattaaaggtgaccccggccggcctggaagt
agtggattacctgggtcttttggagagaaaggaaataagggtcctgcaggaaatcttggc
gctcctggatccccaggtgtgaaagggaataaaggtggacctggaattcaaggaccaaaa
ggggagccaggtcgtagaggagattctggcaccaaaggaagtgcaggaactgacggtccc
aaaggagagaagggtgatcctggaccagagggtccacgaggactcggtggagaagctggt
gtgaaaggagcaaagggtgatcgtggagctccaggcccaagaggagttcaaggacctgct
ggtgtacctggcagaaatgggtcacgaggagacccaggtgacatgggagaaagagggaac
ccagggccagcaggacctaagggagacagaggaagacctggtattagttatccaggacca
cgaggtccttcaggagataaaggagaaaagggattcccaggaccacagggaggacgtgga
gactttggtctcaaaggagcagcaggaccaaagggagagaatggagagtctggtgaccct
ggacctgtaggagaaccaggcccccgtggaccaactggaggttctggacttcagggtgac
ttaggaccttctggagaccctgctttgacagaatgcgatgtcatgacctacgttcgagag
acatgtggatgctgtgactgtgagaaacgttgtggtgctctggatattgtgttcattatt
gacagctccgaaagtattggatacacaaactttactctggagaagaactttgtcatcaat
gttgtgagtaaactgggatctatcgctaaagatccaaaggctgatattggtaagttgtat
ttcttcatggattga
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