Bufo gargarizans (Asiatic toad): 122945310
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Entry
122945310 CDS
T07965
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
bgar
Bufo gargarizans (Asiatic toad)
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122945310 (PMS1)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122945310 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122945310
NCBI-ProteinID:
XP_044160287
EnsemblRapid:
ENSBGGG00000006917
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All DBs
Position
8:complement(104523848..105012298)
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AA seq
961 aa
AA seq
DB search
MHQLSSSTVHLLSSAQVITAVVSVVKELVENALDACATNIEVKLENFGFDKIEVRDNGIG
IKAADTPVMGIKHYTSKISSHEDLESLQTYGFRGEALCSICSVAEVHISTKTDTDPVSTQ
YLLDSNGHVLSEKPSHLGQGTTVSVMKLFKNLPVRKQYYSTAKNFKEELKKIQDLLISYG
LIKPDVRIVLVHNKVIVWQKNKVSNHKMALISVLGTTVMNAMTPFQHQCENPEIFINGYL
PRPGADQTLTSVHGPEKSFIFINQRPVLHKDILKITWVFPRFAHLSLAFFVGGSGMGGRL
IEIHRGIYTGLLLGLTIRPLKKQGETRVGQGAITLSSLIVRLYYNERKNFSHCYPVFFMN
ILVPASSVDVNVTPDKTQVLLHNKEFVLQAVENVLKSVYTDTVTVSVCKPEAQSKNINTK
YIEYPSTEEQKKNYCGNEDRGEQTVSLSPENNKNNDSERELQSHVYLKHQSSSHDQSLNV
DFAGKECPEAYIISSSSNQGNQSDYTLRRNQKVSLEIKVLKNIAPSDKHTVTDDDWSRGH
SLRNATGEDLQPVMILSPSNVSHVVENVYENMDKTCNENTNQKSANITEKFGFITAYDLM
NNQVIRKPMSAIKIFTQEYRAKFLKDSPVVHFDEIPSVISKLWEHLSEEDKLRYEEKATK
DLQRYNSQTAKAVGETKETGEKNKLTLNKIPQKIKLKTAMSNQQILNKLFHSQVQKKAVV
LTVKTIKIDFSLCNLKKQLCNLGRREMLDFGELTVISKLNLPGAWIVASKNDIALLNPYR
VEEALLYKRLLKDHKIPVDKLDLPIILNDRLVGGPEYFTALLSMQKDSPRPNGHIYFSDV
RLTYNGFQIKMMPGSSNFTDHVEIEAITKHLPFFGITDLKEVLSSVIKGNKNLWECRPLK
VLNYLEGEAVRLARQLPLNLSKLDVIDTLHRMEKQLCGNQKECIHGRPFFYQLSDIPESD
D
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagttgtcttcgtccactgtccatcttctgtctagcgcccaagtgataacagca
gtggtcagtgtagtaaaagaacttgtagagaatgcgttagatgcatgtgctaccaatata
gaagtgaaactggaaaatttcggctttgataaaattgaggtccgagataatgggattggc
attaaagcagcagacacacctgttatgggcatcaagcattatacatctaaaatatccagc
catgaagatttagaatcattacaaacatatggctttcgcggtgaagctttgtgctcaatc
tgctccgttgccgaggtacacatttcgacaaagacagacactgacccggttagcactcag
tatcttttggatagcaatggacatgttttgtcagagaagccatcacaccttggacaaggc
actacagtctctgtaatgaaattgttcaaaaatctgcctgttcgaaagcagtattattcc
actgcaaaaaattttaaggaagagctcaagaagattcaagatctacttatttcatacgga
cttattaagccagatgttaggattgtacttgtacataataaggtgattgtctggcaaaaa
aataaggtctccaaccataaaatggctcttatttcagttttgggaactacagtcatgaat
gctatgaccccctttcagcatcagtgtgaaaatccagagatatttattaacggatacctt
ccaaggccaggggcagaccaaacactaactagtgtccatggcccagaaaagagttttatc
ttcataaaccagcgccctgtccttcacaaagacatattaaagattacctgggtgttcccc
cggtttgcacatctttcattggcgttctttgtgggaggttccggaatgggagggagactt
attgagattcacagaggtatttataccggcttactactaggattaaccatacgccccctg
aagaaacaaggcgaaacacgcgtcgggcaaggagccatcacgctatcctctctgatagtt
cgtctgtattataatgaaagaaagaatttttcccactgctatccagttttcttcatgaat
attcttgtcccagcttcatctgtggatgtaaatgtaacaccagataaaacccaagtgttg
ctacataataaggaatttgtccttcaagctgtggagaatgtattgaaatctgtgtacacg
gacacagtaactgtgtcagtttgcaaacctgaagcacagtccaaaaatattaacaccaag
tacattgaatatccaagtacagaggagcaaaaaaaaaactattgtggaaatgaggataga
ggagagcaaactgtgtctttgtctcctgaaaataataaaaataatgatagtgagagagag
ctacagtctcatgtgtatttaaaacatcagtcatccagccatgatcagtcacttaatgtt
gactttgctggcaaagaatgtcctgaagcatatataattagttcttcatcaaaccaagga
aaccagagtgattatactttaagaagaaaccagaaagttagtcttgaaataaaggtactg
aaaaatatagcacccagtgataagcatactgtaactgatgatgattggagcagagggcat
tctttaagaaatgccactggagaagatttacaaccagtaatgattttgagtccttcaaat
gtaagccatgttgttgaaaatgtatatgaaaatatggataagacgtgtaatgaaaataca
aaccagaaatcagcaaatataactgagaaatttggtttcattactgcgtatgatctcatg
aacaatcaagtgatcaggaaacccatgtcagcaataaaaatatttactcaggaatacagg
gctaagttccttaaagacagtccagtggttcattttgatgaaataccttcagttatttcg
aagctttgggaacacctcagtgaagaagataaactcagatatgaagaaaaagcaactaag
gacttgcagaggtacaactcgcagactgcaaaagctgttggggaaacaaaagaaacaggg
gaaaaaaataaattgaccctgaacaaaatccctcaaaaaattaaactgaaaaccgcaatg
tccaatcagcaaattttgaataagttgtttcattctcaagttcagaagaaagctgtggta
ctcactgtcaaaacaatcaaaatagattttagcttgtgcaatctaaagaaacaactttgc
aaccttggaagaagagaaatgcttgattttggggaacttaccgtaataagtaaactgaat
ctacccggtgcttggattgtagcatcaaagaacgatattgctttactgaacccatataga
gtagaagaagctttattgtataaacgccttctgaaagaccataaaattccagtggataag
ttggacttgcctattatattaaatgacagattggttggtggacccgagtatttcacagct
ctgctaagtatgcaaaaggatagtccaagaccaaatggacatatttacttctcagatgtc
agactcacatataatggatttcagataaaaatgatgccaggctcatcaaattttactgac
catgttgagattgaagctataactaaacatttgcccttttttggaataactgatctcaaa
gaagttttaagctctgtgattaaaggaaataaaaacttgtgggagtgtaggcccttgaaa
gttctgaattatttagagggagaagctgtaagattagctcgacaattgcccttaaaccta
tcaaaacttgatgtcattgacacattgcatcgtatggaaaaacagctctgtggtaaccag
aaagaatgtatccatggtcgaccgtttttctaccaactttcagacattcctgaatcagat
gactaa
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