Bufo gargarizans (Asiatic toad): 122946091
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Entry
122946091 CDS
T07965
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
bgar
Bufo gargarizans (Asiatic toad)
Pathway
bgar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122946091 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgar03400
]
122946091 (APTX)
Enzymes [BR:
bgar01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
122946091 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
122946091 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
122946091 (APTX)
DNA repair and recombination proteins [BR:
bgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122946091 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
122946091 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
DUF4682
Motif
Other DBs
NCBI-GeneID:
122946091
NCBI-ProteinID:
XP_044161366
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All DBs
Position
1:complement(313761425..313817062)
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AA seq
360 aa
AA seq
DB search
MVFRLRPSGFVSRTLGKRSTMLDCWLVSKENARCRIKLPHAQPVFIGRGPETQIVDKKCS
RQQVQLISDCNKGYVKVRQIGTNPSSVDSVDIGKDHEAKLKPGHVLYIVNKLYPYSVEFI
QEPGTSRAEEAPETIKRVDKRSHEDPQNDHLEMSRKCPKSQSDSMESSKRKEKPQCIPEV
KGQGHWSQGLKVSMQDPDMQVFKDDKVVVIKDKYPKARYHWLVLPWQSISSLKMLQPEHL
ELLQHMHEVGEKIAQQHSAHSKAPFRLGYHVIPSMSHIHLHVISQDFDSPCLKNKKHWNS
FTTDYFLDSKDVMDMIKLKGKVAVKDGASELLKTSLQCNVCKIQQATIPQLKEHLKKHWT
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggtttttaggctccgcccctctgggtttgtcagcagaacactaggtaagaggtctaca
atgcttgattgctggttagtaagtaaggaaaatgcacgctgccgaatcaaactgccccat
gcgcagccagtatttattgggcgagggccggagacacaaatagtggacaagaaatgttcc
cgccagcaagtgcaattgatatcagattgcaacaaaggttacgtgaaagtcagacagata
ggaacaaacccaagcagtgttgattcggtggacatcggcaaagatcatgaagctaagttg
aagcccggccatgtactatatattgtgaataaattgtatccttactcagtagagtttatt
caggaaccaggaacctccagagcagaagaggccccagaaaccataaaacgtgtagacaaa
agatcccacgaggatccgcaaaatgatcacttggaaatgtctagaaaatgtccaaaatcg
caaagtgattcaatggaaagcagcaagagaaaggaaaagccacagtgtattcctgaggtt
aaaggccaaggacactggagtcaaggattaaaggtttctatgcaggatccagatatgcag
gttttcaaagatgataaggttgtggtaattaaggacaaataccccaaagcgcgttaccac
tggctagtcttaccatggcaatctatctctagcctaaagatgcttcagcctgagcatcta
gagctattacagcacatgcatgaggtcggggagaagattgcccagcagcattcagcgcac
agcaaggcaccatttaggctaggctaccatgttattccaagcatgagccatattcacttg
catgtcatcagtcaagattttgattctccctgccttaaaaataagaaacactggaactca
tttaccaccgattattttttggattctaaagatgttatggacatgataaagttaaaggga
aaagtggccgtgaaagatggagcgtcggagcttctgaagacttccctccaatgtaatgtg
tgcaaaatacagcaagccaccatccctcagttaaaggaacatttaaagaaacactggacc
taa
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