Bufo gargarizans (Asiatic toad): 122946712 Help Entry 122946712         CDS       T07965                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188 isoform X1   KO K14311   nuclear pore complex protein Nup188 Organism bgar  Bufo gargarizans (Asiatic toad) Pathway bgar03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:bgar00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     122946712 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bgar03019]     122946712 (NUP188) Messenger RNA biogenesis [BR:bgar03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      122946712 (NUP188) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like BID Motif Other DBs NCBI-GeneID:  122946712 NCBI-ProteinID:  XP_044162425 LinkDB All DBs Position 9:179703746..179746616 Genome browser AA seq 1735 aa AA seqDB search MAAAGGLDERSSRELWTILLGRSAMRDPIQIKAELDRYGERFLQGLSFYKPPSASSADKV KANKNLAPALKELGQRISKFLGLDEGQSVQLLHCYLQDDYRGTQDSIKLVPQDERQSQAL MLKIADYYYEERICMLRCVLLLLTYFQDEKHPYKKEFNDCMDMLQREDLMGKYRKHFEDI CKEEAPTWETHGNLMTERQVSRWFAHCLREQAMLLEIIFLYYAYFAISPSNLLALTRLFR EQGFGRRQQNRHLVEQSLDPLIDRIGYFEVLILLEGIDMDSLQDYLFKDDLEHPFTNEQQ FCKDMDNILLTFGDIPHHAPVLLAWALLRHTLSPDEAATTVRKMGSVAVQLHVFKYLTSM LRALGSGENNCTTSTACLCVYSLLCFALTSMEEHTLGKQQDIIDAACQVLTAPNLSDLFW NSDTSIGLGILLDSVCTMFPYQLSPLLQLFTALVSNKSTAKKAYNFLDKMAFYTEHYKHK PHDVMSHDDETLWRRQTTKLLYALGMGQTNLRISPGTVGQVICDERGFFVRWEYSYSSWT LFTCEVEMLLHVVSTADVILHCHRVKPIIDLVHKVMKTDLSITDYLLPITSRIYLLLQRL TTVMNPPMDFIASCVDCLTVLTTRYPGKVWTDLHHTGFLPFAASSSSSHIISTENMNAGG YGTLLAIEQSNGEYSVTVSFLRLITTLVKGQLGNVQGQGLVPCILFVLREMLPNYHRWRY NSHGVRENLGYLILNLIHTILNLCPDIDPQSSPLNLQSLCIFSLTNTEAGQAVINIMGIG VDAINVVMASQAGSSGTEGQGQMLIQTVKLAFSITNNVIRLKPPSSGVSPLEQALTQHGA HGNNLIAVLAKYIYHKYDASLPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLNRLQ CSIEDMQIKVMILEFLTVAVETQPGLIELFLNLEVKDTNGTKEYSLGQWSCLQVVLDLID LQQSDRFWCTPQLHRSAISFLHALWQDRRDSAMTVLRTKPNFWENLTAPLFGTLVPPSES SDLSVLETCAFIMRIICLEIYYAVQGSLDKSLKSILGKFSKERRFTYWSNYMQSLVQRVV ETEGGCSSFTEYQRLLSAWRVLLIISTHYADVMHLTDMKVKQALFQDILSGTEILFQVPS SAPCLQLGFMHCTLMMILLRRWKNELNSPEDILKSLARILEGVLQAEKQQMEKAKARIFS ALICVLEMKPMKASNIPQYQQLVLSVCENLQDEVMSLIDETRHGLTTGDGAEDKDSMDTD DMPRTRHKDQRDTVCVLALHLAKELCQADEDGDQWIQVIRQLPVLPLLFSALEISLRGKQ NLHFCEASFHLLFTLAKTHQGAAAIAGAGITQSMCLPLLSVYQLSTNGASTVQPPLSSRK AVDAPSWPGVYRLTVSLMERLLKTLRYNFLTDALDFVGVHQERILQCLSAVRTVQSLSCL EEADHTVGFLLQLSNFTKEWHFHLPQLMKDIQVSLCYLCQSCTSLLYSRKMLQHYLQIKS GEAVTQGSTSRGQRTPQTPSKQSKPESEALELKALRSVQRSLLKILSKTLAALRAFTPDL CQILQPLDLAQYDLLLALNFSTPAFDADVVPSFGTFLATVNVMLNMLGEMDKKKDPPFPS AAPASPSEENKNLRPLLLFIIENCFYLSISQAVRYLRDPAVHPRDKQRMKQELGSELSTL LSSLNRYTRRGVPSSPAVGVLPSPQLKAGFSGKAAPEAQEPIIQLVQAFIRHVQR NT seq 5208 nt NT seq  +upstreamnt  +downstreamnt atggcggctgccgggggcctggacgagagaagcagccgggagctgtggaccatcctgctc ggccgctccgctatgagagatcctattcaaatcaaggcagagctcgaccgctatggagaa agattcctgcagggattgtccttttacaaaccacccagcgcgagctccgcagataaagtg aaggccaacaagaatttagctcctgccctgaaggagctggggcagaggatcagcaaattt ctgggcctggatgaggggcagagcgtgcagctgctgcattgctatctccaggacgattac agagggacacaggactctataaagcttgtaccacaggatgaaaggcagagccaggcactg atgctgaagatcgcggactattactatgaagagagaatttgtatgctgcgctgcgtcctg ctcctgctgacctacttccaggatgagaagcatccgtacaagaaagaattcaatgactgc atggatatgctgcaacgggaggacttgatggggaaatatcgcaagcactttgaagatatc tgcaaagaagaagctcccacatgggaaacgcacgggaacctcatgactgaacgtcaggtg tcccggtggtttgcacactgtctacgggagcaagcaatgttgctggagataatcttcctc tattatgcctactttgccatctccccctccaacctactggcgcttaccaggctgttcaga gaacaaggttttggacgcagacaacaaaaccgtcacttggttgagcagagcttagaccct ttaatagacagaatcgggtattttgaagttctcatcctgttggagggaatcgacatggac tctctgcaggactaccttttcaaggatgacctcgagcatccatttaccaacgaacagcaa ttctgcaaggacatggacaacatcttgttaacatttggagatatccctcaccatgctcct gtccttctggcctgggctctgctgcggcacactctgagcccagatgaagcggctacaacc gtccggaaaatgggcagtgtcgccgtccagctccatgtcttcaagtatttgacgagtatg ctgcgagcccttggtagtggtgagaataattgtacaaccagcacagcatgtctatgcgtc tacagtctgctgtgtttcgctttgacgtccatggaagaacataccctgggcaaacagcag gatattatcgatgcagcctgtcaagtgctgaccgcaccaaacctctcagatctcttttgg aattcggatacttcaataggcctgggaattttactagacagcgtgtgcacaatgttcccc tatcagctttctcctctactccagttatttaccgctcttgtctcaaacaagtccacggct aagaaggcctataacttcctggataagatggcattttacaccgagcattataagcacaag cctcatgatgtcatgtcgcacgatgatgagacgctttggaggagacagaccaccaaactg ctgtatgctttaggaatgggccagactaatctgcgtatatcgccaggaacagttggtcag gtgatatgtgatgaacgcgggttttttgtgcgatgggaatactcgtacagtagctggacc cttttcacctgtgaggttgagatgcttcttcatgtagtgtccacagctgacgtgatactg cattgtcacagagtaaagcccatcatcgaccttgtgcacaaagttatgaagacagacctg tcaatcacagactatcttctgcccatcacctctcggatttacctgctcttgcagcggtta acaactgtcatgaaccctccgatggatttcatagcctcttgtgtggactgcctgactgtt ttaactactcgatatcctggaaaggtttggacagacttgcaccacacaggttttctgccc tttgctgccagctcttcgtctagtcacattatcagcactgaaaacatgaatgctggagga tacgggacgctcctggcgattgagcagtccaatggggaatatagtgtcacagtctcattc ctccgcctcattaccacgttggtgaagggtcagctcggcaatgtgcaaggtcaaggtctt gtgccctgtattctgtttgtgttgagagaaatgcttccgaattaccacaggtggcgctac aactctcacggtgtgagagaaaacctcggatacctcatcttgaacctgatacataccatc ctcaacctgtgtccggacattgatccacaaagcagccccctaaacctgcagagcctttgc atcttcagtctaaccaacaccgaggcaggtcaggccgtcattaacatcatggggatcggc gtggatgcgatcaacgtggttatggcctctcaggctgggagtagtggaactgaaggacaa ggccagatgttaatccagacggttaaattagcattctccataaccaataatgtcattagg ttgaagccgccatctagtggtgtgtcccccctggagcaggcgctcacgcagcatggagct cacgggaacaacctcattgctgttctggcaaaatacatttaccataaatacgatgcttca ttgccgcggctggctatacaactgctgaaacgcctggctacagtggcgcccatgtcggtg tatgcctgtctgggaagtgacgcagctgctatccgggatgcttttctcaaccgtctgcag tgcagcatagaagacatgcagataaaagtcatgattctggagttcctcacggtcgctgta gagacccagccggggctcattgaactgttcctgaatttggaggtgaaggacactaatgga acaaaggagtatagcctggggcagtggagctgtttgcaggttgtactggacctaattgac ctccagcagtctgaccgtttttggtgcacgcctcagctgcaccgctccgccatttccttt ctacatgccttatggcaggatcgtcgtgacagtgcaatgaccgtcctaagaaccaagccc aatttctgggagaacctgacagctcctctctttgggacactcgtacccccctctgagtct tcagatctgagtgtactggagacctgcgctttcatcatgagaattatctgcctggagatc tactacgcggttcagggatcgctggacaagtctctgaagagcatactgggaaaattctcc aaggagagacgcttcacttactggtcaaattatatgcagtcactggtgcaacgtgtagtg gagacggaaggcggctgcagttcattcaccgagtaccagaggctgctgtcggcctggcgc gtgctgctcatcatttccacccattatgcagatgtgatgcacttgacagacatgaaagta aagcaggcgctattccaggacatcttgtcaggaacagaaatcttgttccaggtccccagc tcggctccttgtctgcagcttggcttcatgcactgcacgttgatgatgattttactgcga cgatggaagaatgagctcaactcaccggaggacattctcaaatctctggcgagaatccta gagggcgtcctgcaggccgagaaacagcagatggagaaggcgaaagcccgaatcttctca gccctgatctgtgtgttagaaatgaaaccgatgaaagccagcaatattcctcagtaccag cagctggtcctcagtgtgtgcgagaatctgcaggacgaggtgatgtcgctcatagacgaa acacgtcatggactgacaactggagatggtgcagaggacaaggacagcatggacactgat gacatgcccagaacgaggcacaaagaccaacgtgatacggtttgcgtgctggctttacac ttggcaaaagagctgtgccaggccgacgaagatggcgaccagtggatacaagtcatcagg cagctacccgtcctacccttgcttttcagcgccctggagatcagcctcaggggcaagcag aacctccatttctgtgaagcatctttccacctgttgttcactttggccaaaacacatcag ggtgctgcagccatagcaggtgctggcatcactcagagtatgtgcctgcctctgctgagt gtctaccagctgagtaccaatggtgcgagcacggtccagccgccactgtcctcccgtaaa gctgttgatgctccttcttggccgggcgtctaccgactgactgtatctcttatggaaagg ctgctaaagacacttagatacaacttccttacagacgccttagactttgtaggtgtccac caggagaggatattacagtgcctgagcgcagtgcgcaccgtgcagagtttatcctgcctg gaagaggcagatcacacagtcggcttcttgctgcaactctccaacttcaccaaagaatgg catttccatcttccgcagttaatgaaggacattcaggtcagtttatgttacctgtgccaa tcctgcacctctctgctgtacagccgtaagatgctgcaacattacttacagataaaaagc ggagaagctgtgacacagggttcaacctctcgtggtcagcgcactccccaaaccccatcc aagcagtcaaagccagaaagtgaggccctggagctgaaagctctgcgctctgtccaacgc agtctactaaagatcctcagcaagacgctagctgccttgagggccttcacaccagatctc tgtcagatacttcagcctctggacctggcacagtatgatctgctgttggccctgaacttc agcacgccagcatttgatgcagacgttgtaccatcatttggcactttcctggcgactgta aatgtgatgctcaacatgcttggagagatggataagaagaaagatccaccatttccatct gcagctcctgcaagtccttcagaggaaaacaagaacctcaggccgctgctgctgttcatc attgagaactgcttctacctgtccatctcccaagcggtacgctatctgcgggacccggct gtgcacccccgggacaagcagcgcatgaagcaggagcttggctctgaactgagcaccctt ctctccagtctgaatcgttacactcggcgaggggtcccgtcttctcctgctgtgggtgtc ctgccctcgcctcaactgaaagcaggcttttctggcaaggcagcccccgaggcacaggag cccatcatccagctggtgcaagcctttataaggcacgtacaaagatag

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