Bufo gargarizans (Asiatic toad): 122946797 Help Entry 122946797         CDS       T07965                                  Symbol SETX Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism bgar  Bufo gargarizans (Asiatic toad) Brite KEGG Orthology (KO) [BR:bgar00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bgar03021]     122946797 (SETX) Enzymes [BR:bgar01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      122946797 (SETX)     5.6.2.5  RNA 5'-3' helicase      122946797 (SETX) Transcription machinery [BR:bgar03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      122946797 (SETX) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 AAA_30 UvrD-helicase AAA_22 AAA_16 Helicase_RecD SLFN-g3_helicase ResIII TniB LAMB4 Motif Other DBs NCBI-GeneID:  122946797 NCBI-ProteinID:  XP_044162562 LinkDB All DBs Position 9:complement(193581893..193610824) Genome browser AA seq 2479 aa AA seqDB search MSTCRWCTPGAPVSAELLTSYAARKLQSDDLIGANDDLSYCMECVAEYHRVREQAPHLHK ALWKMETARITAHLEKSLREEIEDDEVLLVEEDGEKQLFGYAGLESNVRVPLLEILKYPY LLLDRRVCELCVDALCKMETVNNPFQVYEKVPGIYLLLVHPNENIRRWAILTARAQGKVD RDDYYDLQEVFTCLFKFIELGLFESPDIYSSSEVEDGKLILLPAHLYDTTNYKNYWLGVC MLLTVLEEEAMDSLLLGPDKQNDFMQSILYMMEKRTDDESTNPFWPALHCFMIILDRLGS KVWGQLIDPIQAFQTIISSPSYNNEIENIRKSCQRLAKDHPDPEDDDDDDLVSCSQMVYN FNSEKPKKDTGWKSAICPDYCPNMYDDMQSLANILQSDTGQDMRVHNSTFLWFIPYVQSV MDLKDLGVAYIMEVIHHLYSEIKEALSQRSRPCDKVSELFIRVLVSIIELHRSKKCLHLL WVSSHKWVEALIKGSLIPTKDMAARPNSRITSTTSPLSSSPNSQAPSSVQFACIQLIRSL LREGYQLGQNSTCKQYLDKLNLVIRGNALWNLESDIQGLQNCLIEIIKVIKNRTSMAPNS ALEQTTMSKVQSVPFIKTERIDEDEDWYGCTSSSPLPSLDVPPVTIRSGCSTGSPLPSPD IQPTVTSKPSQHGAEGLLFPIKKEPQEVQAKGSSLHGSVLKTNLKKQPFNEIGQENTQCK EKPVGWKSKLSEVMAKSSNRICKKEPSASESNVSSSSEAPSALKPCYVRIKKEPDLWQTA KSCNGSDANEESDDVDDDIPLIQVRKSLHEKTKGSAADNLAVSERLRRLTLENDRASNLV KREPSNEEAEYNDCVMEGEGEDDLPLSEIKKRLLLKKGKKLAGSMVDRDLPRSAAQESTP CQEFGLIERKVKETRRSLPSDNSSDPIIILSDDSSDEEQKDFLKFVKTEKRESGQEARSS SSAKFMKTKSAQIKQEPAIEVVDEYNSQCFEFETEDEIYSAWEDPQLQEEKPDLLSKCKK TETDQTPDDDIVSADRLDQWGYDTDYICDDVIEKAAEDAERQFQESLKASNAQTGGECSN DKPSHEGTSLGWFHGKSSREAKTKNLKFDSRSKPPKMTKETSSIRPKSKAELSAKQNKVP SVKSTKNKSPRKAQGQVRKFSSPGKASLAVVPPKKVRKCPEQSSTAEKLGLKKGPRKAFD LSQRSLNSLTELREHGKSAGCVEPKRQKAKLISPQSIMVKRNKKMLACQDLQFYRQTRPK DIEKRRSSSNSENSFQTSENPAKPVTKPTDGDSSLQSRAEKKEQLNGTSRKRESSRMSPE ASTSSKTSEEDDWNDLPQTKMDPPSPSEPAKTELEDYEEEDDDPLFLTQADPLDMDLCSQ VESEIIQENRPSIVEEQVAPVQEVNQTLKCKYVDCSEPVQAPAYHCPKHNTSEKTDDHLF VRPGLPLSLQKPTKPATTKVFSTETASRTANLTKDLENNPKYPTIPKSKAQLPKPPLPKL VLPQRRPPAPLTTSSVLQPLINQNNVPLLPTSNSGPNIGKSFVAGRLPQLDQAWLMQLVL RWKYEMFDNFQQFGAPSDLCPLPLLNVPLKFSGYDDYFKVFFPLMLQNAFESLEQEWREK RRPQSAHPYKLHLQNFCLDSQVNRGEFRAWIRDKDLHFQHHPKEDDLVFLLTSEPPDEHS REERESSASLVYHMGHVFRFNRSQNTQNFEREQYSLCDLCIHTHGNLSAFRNQQVQCVII GSFVTTLRQFKALLQLQRNPLFRPIIYPNATDLSPKGSAENIPTSSLRSLREYNRDQMSA IEQAYAMVTQPPRFPKICLIHGPPGTGKSKTIVGLLFRMLMEKRNSDVPNQNFNAKNKRN RVLVCAPSNAALDDLMKKIILEFKEKCHDKKNTLGNCGDINLVRLGAEKTIDSDVVKFSL DCQVNYRLNRAHQDHGILRQKEALDRQLDQLSRQRAMERCNKQTYQELDQKMNRLSKERQ RLANDLRELRRRPQEIQRNIILESHVICCTLSTSGGVLLESAFRQLGHEPFSCVIVDEAG QSCEVETIIPLLHRCTKLVLVGDPKQLPPTVISTKAEDLGYGQSLMARLCRQLETAGQGS LILQLTVQYRMHPDICLFPSKHFYKQVLKTDRATEEARCSSDWPFQPYMVFDVTDGYEVK ERESFANPQELKMVVALVKLIKSKKKEFTFRNIGIITPYRAQKMQIIEQLQREFGKDSRP SEVDTVDGFQGRQKDCIIVTCVRANFVQGAIGFLASQQRLNVTITRARFSLFILGSLRTL MENKDWNSLIQDAKKRGALFKTREENYQKDVNRILKLKTAVSHSSRPAVERHAAGSPSNT TPAETPSREHVLPPQLAVQPPQRIIVHPAVDIRPMQSRMTAPVASSVTRAKLPDPRLARR QSEESRDSSPSNSGVQNLQSRSQTHVSSSSSVTGVKRPSYPAPGDRPPRGAHRFSRDQDY RDPSTQFDQNQDAKKRRTS NT seq 7440 nt NT seq  +upstreamnt  +downstreamnt atgagcacgtgccgctggtgcacgccgggcgctcctgtctccgcggagctgctgacgagt tacgccgccaggaagctacaaagcgatgacctcatcggagccaacgatgacctctcctac tgcatggagtgcgtggcggagtaccaccgggtccgggagcaggccccgcacctgcacaag gctctgtggaagatggaaacggcacgcatcaccgcgcatttggagaagtctctgcgggaa gagatagaggacgacgaggtgttgttggtggaagaagatggagagaagcagctgtttggt tacgccggcctcgagagtaacgtgcgggtccctctcctcgagatcctcaagtatccgtac ttgttgctggacagacgcgtctgtgagctctgcgttgacgccttgtgcaagatggagact gtgaacaaccctttccaagtttacgagaaagtgccagggatctacctcctccttgtacac cccaatgagaacatccgccgttgggccattctgactgcgagggctcaggggaaggtggac cgggatgactactacgacctgcaggaagtgtttacctgcctgtttaagttcattgaactc ggcctgtttgaaagtcctgacatttacagcagtagtgaggtcgaagatggaaagctcatc ctcctaccggctcacttgtacgataccaccaattacaagaactactggctaggggtctgc atgttactgaccgtcctggaggaagaggccatggactccttgctgctgggaccagacaag cagaacgacttcatgcaatccatcctttacatgatggagaaacggacagatgatgaaagc accaatcccttttggcctgcactccattgcttcatgatcatcctcgatcgcctagggtcc aaggtttgggggcaactgatcgatccaatccaagcatttcaaaccatcatctcgagcccg agctataataacgagatcgagaacataaggaagagttgtcagaggctagccaaggaccat cccgatccagaggatgacgacgacgacgacttggtgtcgtgtagtcagatggtgtataac ttcaacagtgaaaaacccaaaaaggacactggatggaaaagtgccatttgcccggactat tgtcctaacatgtacgatgatatgcaaagcttggccaacattctgcagagtgacactggc caagatatgagagtccacaatagcactttcttgtggttcataccctatgtccagtcagtc atggacttgaaagacctgggggttgcttacatcatggaggttattcaccacctgtactcg gaaataaaggaggccctcagtcaaagaagccgtccgtgtgacaaggtctcagaacttttt atcagggtcttggtttctatcattgaactgcatagaagcaaaaagtgccttcacttgctg tgggtgagctctcacaagtgggtcgaggccctcatcaagggctctctgattccaaccaaa gacatggcggcacggcccaactcgagaatcacctccaccacctcacccttgtcgtcttca ccgaactctcaggccccatcttctgtacaatttgcgtgcatccagctgatcagaagcctt ttgcgggagggatatcagctgggacagaactctacttgtaagcagtatctggacaaactc aatctcgtcatcaggggaaatgctctctggaacctcgagtcagacattcaaggtttacag aactgccttattgaaattataaaggtcatcaagaacaggacatccatggctcctaattcc gctctggagcaaacgaccatgagcaaagttcagtctgttcctttcatcaagactgaaagg attgacgaggatgaggattggtacgggtgcactagtagctctccgcttccatctctagat gtccctcctgttactatcaggtctggatgtagcactggttctccattaccatctccagat atccaacccacagttaccagtaagccttcacaacatggggcagaagggttgcttttccca attaaaaaggaacctcaggaggtccaagccaaaggttcttccttgcatgggtctgtttta aagactaacctcaaaaagcaaccgttcaatgaaattggccaagaaaacacgcagtgcaaa gaaaagccagtgggctggaagtcaaaactaagtgaagtcatggcaaagtcttccaatcgg atatgtaaaaaagagccttcagcgtctgaaagtaatgttagcagcagctctgaggcaccc agtgcattaaaaccatgctatgtgcgcattaaaaaggagccggacttgtggcagacagca aaatcttgtaacggaagtgatgccaatgaagaaagtgacgatgttgatgatgatatacct ctgatacaagtcagaaagtccttgcatgaaaagacgaagggctcagctgcagacaacctc gcagttagtgaacggcttcgaagactgacgttagaaaatgatcgagcgtccaacctggtg aagagggagcccagcaatgaagaggcagaatataatgattgcgtgatggaaggcgaagga gaggacgatctgccattatctgaaatcaaaaaaaggttgctcctaaaaaagggtaagaag ttggccggctccatggttgaccgggatcttcctcgttcagctgctcaagagtcgacccca tgccaagagtttggccttatagaaaggaaagttaaggaaacgagaagatctttgccttct gacaattcctctgatcccatcataatcctctctgacgattcttcagacgaagagcagaaa gattttcttaagtttgttaaaaccgagaaaagggaaagcggccaagaagcaagatcgtct tcttcagccaagtttatgaagacgaaaagtgcccaaataaaacaggaaccggctatagaa gttgttgatgagtacaactcccagtgtttcgagttcgaaacagaggatgagatttattca gcttgggaagacccgcagttacaggaggaaaaacctgatcttttaagcaaatgtaaaaaa acggaaactgaccaaactcctgatgacgatattgtatcggctgatagacttgatcagtgg ggatatgacacggattatatatgtgatgatgtaattgaaaaggcagcagaagatgcggag aggcagttccaagaatccttaaaagcttcaaacgctcaaacgggaggcgaatgcagcaac gataaaccttcacatgaggggacaagtttaggttggtttcatgggaaaagttcaagggag gccaaaactaaaaatcttaaatttgattctagaagtaaaccgcccaaaatgaccaaagaa acgtcctcgatcaggccaaagtcaaaagcagagctgtctgcaaagcagaataaagttcca agtgttaaatctacaaaaaacaaaagcccacgtaaggcacagggacaagttagaaaattc agcagcccaggcaaagcatcgcttgccgtggtcccaccgaagaaagtacgcaagtgtcct gaacagtcttctaccgccgaaaaacttggcctgaagaagggccctcgcaaagcctttgac ttgtcccaaaggtctctcaatagcttaactgaactacgtgaacacgggaagtcggcaggg tgtgtggaacccaagaggcagaaggccaaactcatctctccacaatccataatggtgaag aggaacaagaagatgttggcttgtcaagaccttcagttttaccgtcaaactagaccgaag gatattgaaaaaagacggtcgagtagcaactctgagaacagctttcaaacttcggagaat cctgcaaagccagtgacaaagccgacggatggcgattcctctttacagagtagagcggag aaaaaggaacaactaaatggtacttcaaggaaaagggaatcttctaggatgtctccagaa gcttctactagctctaaaacaagtgaggaagatgactggaatgaccttccgcagacaaag atggatccgccttcaccttctgagccggcaaagacggaactggaggattatgaagaagag gatgatgaccctttgtttttaacccaagctgatcctcttgatatggacctgtgctcacaa gtagagtctgagatcattcaagaaaacaggccgtccattgtggaggagcaagtggcgccc gtgcaagaggtgaaccagactttgaaatgcaaatacgtggactgctcagagcccgtccaa gctccagcttatcattgtcctaagcataatacttccgagaaaaccgacgatcaccttttc gttagacccggtttgccgctatctctccaaaaacctacgaaaccagccaccaccaaggtt ttcagtacggagaccgcttccagaactgccaatctcacaaaggacctggaaaataatccg aagtatccaacgattccaaaatctaaagctcaacttccaaagccccctctgcccaaacta gtcttgccacaaagaaggccaccggcccccctgaccacaagcagtgttttgcagcccctc atcaatcagaataacgtcccacttctgcccacatctaacagtggtccaaatatcgggaag tctttcgtagctggacgcttgccacagctggaccaggcctggctcatgcagttggttctg cgctggaaatatgaaatgtttgacaacttccagcagttcggagcccccagtgacctctgc ccattaccactgctaaatgtgcctctgaagttctccggttatgatgattattttaaagtc tttttccctttgatgctccagaacgcctttgaatcactggagcaagaatggagagaaaag cgaaggccacaaagtgcccatccgtataagctccacctgcagaatttctgcctggacagc caggtcaaccggggagaatttcgagcctggatacgggataaagatttacacttccagcat catccaaaggaggacgatttggtgtttctgctcacgtcggagcctccggacgaacattcc cgagaagaaagggagtcttccgcgtcactggtctatcatatgggacatgtcttcagattt aaccgctctcagaatacgcagaactttgagagggagcagtactcgttgtgtgacctgtgc atccacacgcacggaaatctgtcggcgttccgcaatcagcaggtgcagtgcgttataatc ggcagctttgtaacaaccctgcggcagtttaaagctctgctgcagctacagaggaacccg ctgttcagaccgatcatttatcccaacgccacagacctctcgccgaaaggcagcgctgaa aatattcccaccagctccctccgcagcctgcgggaatataaccgtgaccagatgtctgcc atcgaacaggcctacgccatggtgacgcagcctccacggtttcctaagatatgtctgatc cacggacctccaggaacgggcaaatccaagactatagttggcctgttgttcagaatgctt atggagaaaaggaacagcgatgtcccgaatcagaacttcaacgccaaaaataaacgcaac cgagttctggtctgtgccccgtccaatgctgcgctggacgacctgatgaaaaagatcata ttggagttcaaggaaaaatgtcacgacaaaaagaacacgctgggaaactgcggcgacata aacctggtgcgtctgggggcggagaagaccatagattctgacgttgtcaagttcagtctg gattgccaggtcaactacaggctgaacagagctcatcaggatcatggcattctccggcaa aaggaagcgttagacagacagctcgaccagctgtcccgccagagagcgatggagcgctgc aacaagcaaacctatcaagagctggatcagaaaatgaacaggctgtctaaagagcggcaa cgtctggctaacgatctgcgagagctgcgcaggagaccacaggagatacagcggaatatc atcctagagtcccacgtcatctgctgcacgctgagcacgagcgggggggtgctactggag tccgccttcaggcagctgggacacgaacccttcagctgtgtcatcgtggatgaggccgga cagtcgtgtgaggtcgagaccatcatccctcttctccacagatgtacgaaactagttttg gtgggagaccccaagcagctgcctcccaccgtcatctcaacgaaagctgaagacttgggc tacggacagtccctgatggcgcggctctgtcgccagctggagactgcaggccagggttcc ctcattttgcagctgacggtccagtaccggatgcacccagacatctgcctctttccatcc aagcatttctacaagcaagtgctgaaaacggaccgagccacggaagaagcgcgatgttct tcagattggcccttccagccatacatggtgttcgatgtgacagatggctacgaagtgaaa gagagggagtcgtttgccaacccacaagagctcaagatggttgtggcactggtaaagctc atcaaaagcaagaaaaaggaatttactttccgaaatatcggcataatcaccccgtaccgc gcccagaagatgcagatcatcgaacagcttcagagagaatttggaaaggactcgaggcca agtgaagtggacaccgttgatggattccagggtcgccaaaaggactgcatcattgtgacg tgtgttcgtgccaactttgttcaaggggctattgggttcctggcgagtcaacagcgcttg aatgtgaccatcacaagggccaggttcagtctcttcatcttggggagcctccgaacctta atggagaacaaggactggaacagcttgattcaggatgcgaagaagcgaggggctctcttc aagacgagagaggaaaattaccagaaagatgtcaacaggatcctgaaacttaaaaccgct gtcagccactcaagtaggccagcggtggagcgacatgcggccggcagtccttccaataca acgcctgcagagacgccttcaagagaacatgtgttacctcctcagctggcggtccagcca ccccagcggatcatagttcatccagccgtggacattcgcccaatgcagagccgaatgact gctccggtggcatcttcagtgacgagagcgaagcttccagatcccaggctggcccggcgg cagagcgaggagtcgagagattccagtccctcaaactctggggtgcagaatctccagagc cgttctcagacccacgtctcctcctcctcatcagtaactggagtcaagcgaccttcatat cccgcccctggtgaccggccaccccgcggagcacaccgcttctccagggaccaggactat cgggaccctagcacacagtttgatcaaaaccaggatgcaaagaagaggaggacatcctag

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