Borreliella garinii BgVir: KK9_0348
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Entry
KK9_0348 CDS
T02048
Symbol
uvrD
Name
(GenBank) UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgb
Borreliella garinii BgVir
Pathway
bgb03420
Nucleotide excision repair
bgb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KK9_0348 (uvrD)
03430 Mismatch repair
KK9_0348 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgb03400
]
KK9_0348 (uvrD)
Enzymes [BR:
bgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KK9_0348 (uvrD)
DNA repair and recombination proteins [BR:
bgb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KK9_0348 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KK9_0348 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_11
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEW68680
LinkDB
All DBs
Position
linear:complement(350201..352297)
Genome browser
AA seq
698 aa
AA seq
DB search
MDKIKNFFSSLNSSQEKIVFSKSKNPILVLAGPGSGKTRVIIAKIVYLIKHMNINPNEIL
ALTFTNKAANEMNDRINDLLKFDKKLHIQTFHSFGSWLLRAYYKDFDRNYDSNFTIWDTN
DVVKFLKEISLAPNFEMAKHIAALILKDKENFFLEKFIKFTEKEYKCIKIYEEEKAKNNA
FDFADLIIKPILMLRQSKSLKESVQSKFKVIFVDEYQDTNYSQFLFLKELYSDGMYFMVV
GDEDQSIYSFRGARIENILEFEKTFDNVIKFYLVQNYRSNSNIVSIANGVISKNKNRYEK
QITTQNGSGKRMKFLVFQSTSDEAEYFSNLLVANDIETAILYRFNSQSFHFETSFLKKNI
PYKVLGSIKFYEREEIKDIICLLRLLINKKDKIAFLRMINKPSRGIGKTTLDKIISSLND
DDVNFNLFCASEKTLSSLKNRAKESLLLFLNIYDELGRKLFEGNYINLSAFIEDVVIKFG
LLDYYKKFDKDEKLRNIDELINSGIEYSGTFEGLAIFLENSSLSPLISGDFKSNIFLSSI
HGVKGLEFDRVVISGLEKGLLPAEIEALTEDRLEEERRLFYVAITRAKSELIITLNLKRA
FRGSFKRTELSVFSQDIDKNFYDTIFIPEYLKESFNNFFIDSKRDVGFNIGDYIIYNGER
GMIVDSWYQGNLQFVKISLINGKKAILSSEYIEKIIKV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggataaaataaaaaattttttttctagcttaaattcgtcccaagaaaaaattgttttt
agtaaaagtaaaaatccaattcttgttttagcagggcctggaagtggtaaaactagggtt
ataattgcaaaaattgtgtatttaatcaaacatatgaatataaatcctaatgaaattttg
gctttaacttttaccaataaagctgcaaatgaaatgaatgatagaataaatgatctttta
aaatttgacaagaaacttcatattcaaacttttcattcttttggatcttggcttttgaga
gcttactataaggattttgatagaaattatgattcaaattttacaatttgggatactaat
gatgtagttaaatttctcaaagaaattagtcttgctccaaattttgaaatggcaaaacat
attgcagctttgattttaaaagacaaagaaaattttttcttagaaaaatttattaaattt
acagaaaaggaatataaatgtattaaaatttatgaggaagagaaagctaagaataatgct
tttgattttgcagaccttattattaaacctattttaatgctgaggcagtctaaatcccta
aaagaatctgttcaatctaaatttaaagttatttttgtagatgaatatcaagatactaat
tattcacaatttttatttttaaaagaactttattcggatggtatgtattttatggttgta
ggagatgaagatcagtcaatatattcttttagaggagccagaattgaaaatattcttgaa
tttgaaaaaactttcgacaatgttattaaattttatttagtgcaaaattaccgttcaaat
tcaaatatagtgagtattgcaaatggggttatctcaaaaaataaaaataggtatgagaaa
caaataacaactcaaaatggttctggtaaaagaatgaaatttttagtttttcaaagcaca
tcagatgaagctgaatatttttctaacttgcttgttgccaatgatattgagacagcaata
ctttatagattcaattcccaatcttttcattttgaaacatcttttttaaagaaaaatatc
ccatacaaggttttaggatcaattaaattttatgagagagaggaaataaaggatattatt
tgtttgcttaggcttcttataaataagaaagataaaatagcttttttaagaatgataaat
aagccctctaggggaattggaaaaaccactctagataaaataattagttctttaaacgac
gatgatgttaatttcaatttgttttgtgctagtgaaaaaactttgagttctcttaaaaat
agggccaaagagtctcttttattgtttttaaatatttatgatgagctgggcagaaaactt
tttgaaggtaattatattaatttatctgcttttattgaggatgttgtaattaagtttggc
cttttagattattataaaaaatttgataaagatgaaaaattaagaaatattgatgagctt
attaatagcggaattgaatattcaggtacatttgaaggtcttgctatttttttagaaaat
tcttcactttctcctttaatttctggagattttaagtccaatatatttttatcttcaatc
cacggtgttaaggggcttgaatttgatagagttgtgatttctggacttgaaaaaggtctt
ttgccagctgaaattgaagcattaacagaagataggcttgaggaagagagaaggcttttt
tatgttgcaatcacaagagctaaatcagagcttattattaccttaaatttgaagcgagct
tttagaggttcttttaaaagaaccgagctttccgttttttcccaagatattgacaaaaat
ttttatgacactatttttattcctgagtatttaaaagagagtttcaataatttttttatt
gatagtaaaagggatgttggatttaatattggagactatataatttataatggagaaagg
ggaatgattgttgatagctggtaccaagggaacttgcagtttgttaaaattagtttgata
aatggtaagaaggctattttgagctccgagtatattgaaaaaattattaaagtttag
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