Borreliella garinii BgVir: KK9_0395 Help Entry KK9_0395          CDS       T02048                                  Symbol rpoC Name (GenBank) RpoC   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism bgb  Borreliella garinii BgVir Pathway bgb03020   RNA polymerase Brite KEGG Orthology (KO) [BR:bgb00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     KK9_0395 (rpoC)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bgb03021]     KK9_0395 (rpoC)    03400 DNA repair and recombination proteins [BR:bgb03400]     KK9_0395 (rpoC) Enzymes [BR:bgb01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      KK9_0395 (rpoC) Transcription machinery [BR:bgb03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      KK9_0395 (rpoC) DNA repair and recombination proteins [BR:bgb03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       KK9_0395 (rpoC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C Motif Other DBs NCBI-ProteinID:  AEW68725 LinkDB All DBs Position linear:complement(398317..402450) Genome browser AA seq 1377 aa AA seqDB search MKEIKDFEKIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCERIFGTTKEWEC YCGKFKSIRYKGIICDRCNVEVTHFKVRRERMGHIELAAPVAHIWYYKYIPSRIGLLLDI TASSLNSILYYEKYVVIEPGDTDLKKMQLLNEDEYIEARERYGMSFNASMGAEAIKTLLE NLDLDELSSKLRIQMIDKDDKTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRP MVQLDGGRFATSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPAK MALELFKPFVIRKLIESEAVFNIKRAKNLIEQEVDEVWQILDLVIKEHPILLNRAPTLHR LGIQAFEPVLVEGKAIKLHPLVCHAYNADFDGDQMAVHVPLTPSAQAESWALMLSTNNLL NPANGHPIVFPSQDIVLGLYYLTMEKKNIVGEGKKFLNFSNVILAINNRSLDYNASIYVK IDGEYKKTTAGRVIFNEALPKGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIIKE LGFKYATKFGCTISMSDIIVPDEKKTYIDRANKEIAKIQNDYAKGVITGEERYNNVVSVW LKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQIRQLAGMRGLMAKTSGDIIEL PIISNFKEGLSVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDVVVRIEDCGTI NGIKVETVKNGEEILESLKEKAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGI EKLVIRSVLTCEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI GGVAQAGSEDDKISLKNAFILNSIEGFNVNVDNGILFTRKGTLKIINVFYEEKIKNIKEI KVLDSQRVIKGIPLFVNKKGVEILSSYIGYAKLRDDKFLIVSEEQEVALKAGTKLEIGVG DYVESGKVIGTFDPFAEPIIAEVKGKIKFKDIILGTTLKEEINTETGNVEKRITDNVFES LDPRIFIIDSSGMEVASYVLPGDAYLQVEDGQNINIGDVIAKLSKGSEKTQDITGGLPRV NDLFETRIPKNLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKHIGVIIKQMMK KVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIASPILIGVTKTSLNIDSFISA ASFQETTKVLTDASIAGKIDDLRGLKENVVIGHLIPTGTGMGLYKKIKVSENIDAKV NT seq 4134 nt NT seq  +upstreamnt  +downstreamnt atgaaagagataaaagattttgaaaaaataaaaattaaaatagcatctcctgatcaaatt agaaattggtcttatggagaggttaaaaagtccgagactattaattatcgaactttgaga cccgagaaggatgggcttttttgtgaaaggatttttggcactacaaaggaatgggaatgt tattgtggtaaatttaaatcaattagatataaaggtattatttgtgatcgttgtaatgta gaagttacccattttaaggtgagacgtgaaagaatggggcatattgagctagcagctcca gttgcccatatttggtattacaaatatataccctctaggattggtcttttgcttgacatt acagcatctagtttaaattctattctttattatgaaaaatatgtagtaattgaaccgggt gatactgatcttaaaaaaatgcaacttttaaatgaagatgagtatatagaggctagagag cgatatggaatgtcttttaatgcttcgatgggagctgaagctattaaaactcttcttgaa aatcttgatcttgatgaactttcatctaagcttaggattcaaatgatagataaagatgat aaaactgataagaaacttttaagacgtcttgaaattattgaaaattttaaaatttctgga aataagccagaatggatgattatggaggttcttcctgttattcctccagagattaggcca atggttcagcttgatggagggcgatttgcaacatctgatcttaatgatctttacagaaga gttataaataggaataatcgtttaaggaagttacttcttcttaatgcgccagagattatt gtgagaaatgaaaaaagaatgcttcaagaatcggtagattctctttttgataattctcat aaaagaaaggttgtcaaaggctcatctagtagacctcttaagtcgctttctgatgcttta aagggcaagcagggaaggtttaggcaaaatcttcttgggaaaagagtagattattctggt cgttctgttattgttgttggacctgagttaaagctgcatcaatgtggactgcccgcaaaa atggctcttgagctgtttaagccttttgtgataagaaagttaattgagagtgaggctgtt tttaatatcaaaagagcaaagaatttaatcgaacaagaagtggacgaggtgtggcaaatt ttagatcttgttataaaagagcatcctattcttttaaatagggcgcctactcttcataga cttggaattcaagcttttgagcctgtgttagttgagggtaaggcaataaaattacatcct cttgtttgtcatgcatataatgctgattttgatggtgatcaaatggcagtgcatgtgccc cttactccatcagcacaagctgaaagttgggctttaatgctttcaacaaacaatctttta aatcctgcaaatgggcatcctattgtttttccatctcaagatattgttttaggtctgtat tatttgacgatggaaaaaaagaatattgttggagaaggtaaaaagtttttaaactttagc aacgttattctcgctataaataatagaagtctagattacaatgcttctatttatgtaaaa attgatggcgaatataaaaaaactacagccggtagggttatatttaacgaggctttgccc aaaggaattgaatttgtaaataaaactcttagtgatttggaactacaaattttaatatca aaagtttacgtagttcatggttcttctactgtaattgaaatgcttgacattatcaaggag cttggctttaagtatgccactaagtttgggtgcacaattagtatgagcgatattattgtt cctgatgaaaagaaaacttatatagacagggctaataaagagattgctaaaattcaaaat gattatgccaaaggtgttattactggtgaagagcgctataataatgtagtttctgtttgg ttaaagactaacgaagaacttactaataagatgatggaaattttaaagaaagacagagat ggatttaatgttatatatatgatggcagattctggtgctaggggtagtagaaatcaaata agacaacttgctggcatgagaggattaatggcaaaaacttctggggatattattgagctt ccaattatttctaactttaaagaaggtctttctgtgatagagttttttatatctacaaat ggagctagaaaaggtctagcagatactgctcttaagacagccgatgctggatatttaact cgaagattagtagacattgctcaagatgttgttgttagaatagaagattgtggaaccata aatggaataaaagttgaaactgtcaaaaatggtgaagaaatattagaatctttaaaagaa aaagctgttgggagttattccattgaaagaataaaaaatccaattactggtgagatcgtt ttagatgcaaatgaagaaatctcagaagccaaaatagaattattagagaaaattggtatt gaaaagcttgtgattagatctgttttaacatgtgaagctgagcatggtgtttgtcaaaaa tgttatggtagagacttctcaaagaataagcctgtcaatattggcgaggctgtaggaata attgctgctcagtctataggtcaaccaggaactcaattaaccatgagaacttttcatatt ggtggagttgctcaggccggcagtgaggatgataaaatatctttaaagaatgcttttata cttaatagcatagagggttttaatgttaatgttgacaatggaattcttttcacaagaaaa ggaactttaaaaataatcaatgttttttatgaggaaaaaattaagaacataaaagagatt aaagttttagattctcaaagagtaatcaaaggaattcctttgtttgttaataaaaagggt gtagagattctctcttcttatattggttatgctaaattaagagacgataaatttttaata gtgtcagaagagcaagaagttgctttaaaagctggcacaaagcttgaaataggggttggt gattatgttgaatcaggtaaagttatcggcacatttgatccatttgcagagcctattatt gcagaagttaaaggtaaaattaaatttaaggatattattttaggaaccactcttaaagaa gagattaatactgaaacaggaaatgttgagaaaagaattacagataatgtttttgaatct cttgatcctaggatttttattattgatagtagtggtatggaggttgcatcttatgtatta ccaggagatgcttatcttcaagttgaagatggtcaaaatattaatataggagatgttatt gctaaactttctaaaggctctgaaaaaactcaagatattacagggggattgccccgtgtt aatgatctttttgaaacaagaatccctaagaatttaaccgaaatggctaaagtaagtgga attgtgcaatttaaatcaattcaaaaaggcaaaaggcttattaatattttagatgagtat ggggttgaacataagcattatattccagccggtaagcatcttttagttagagatggagat gttgttaaagcaggcgatatgctttgtgatggcagaattaatcctcatgatgtgcttgaa attttaggcgggattagtttgcaagagtttctgttggcagaaattcaggatgtttatcga aagcagggtgttagcattaatgacaaacatattggtgtgataattaaacaaatgatgaaa aaagttaagattgtagcagttggtgataccaattttgtttatggacaaaaggtagataag catactttttatgagcaaaatagaaaagtaatcgagcaaggtggtgagccagcaatagca agtcctattcttataggagtaactaagacgtctctcaatatagattcttttatttctgca gcttctttccaggaaacaacgaaagtattaacagatgcttctattgctgggaaaatagat gatcttaggggattaaaggaaaatgttgtaattgggcatttaattcctactggaaccggt atgggactttataaaaaaattaaagttagtgaaaatatcgatgctaaggtttaa

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