Borreliella garinii BgVir: KK9_0525
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Entry
KK9_0525 CDS
T02048
Name
(GenBank) Phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bgb
Borreliella garinii BgVir
Pathway
bgb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KK9_0525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgb03019
]
KK9_0525
Messenger RNA biogenesis [BR:
bgb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KK9_0525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
KH_PNO1_2nd
KH_2
KH_NusA_2nd
HDOD
Motif
Other DBs
NCBI-ProteinID:
AEW68841
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Position
linear:511728..513260
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AA seq
510 aa
AA seq
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MTYIIFSSIFAGFILGFLVRVFLGRLSLLDLEKNLTKVRVESQLEIENERKQIIANAKSQ
MLKEKNQQDRDIRDRKNEIVNLEKRLLQREETLDKRISALDKQQSRVDFKIKEFEQKEKA
IREKEADLVKRLENISGLTREDARKIVIEKVEHESRRDAQVIINKSEQEAQLLADKVAKD
ILVSTMQRIVTEVSSEFTVASVELPNDEMKGRIIGKEGRNIRALETLIGADIIIDDTPEA
VVISCFDPIRKELAKRTLERLVTDGRIHPARIEEVVYNVTNEINSIIQEEGEKVVFDLNI
HGLDKRLIRGLGRLYFRSSYGQNVLSHSKETAIIGEILAKEMKLDPIVVKRACLLHDIGK
GMESISENSEGHAITGAELAQSCGESEIVVNAIAAHHNEVKPESLEAIVVQIADAISASR
PGARRESLNNYINRLKRLEDIAYSFEGVQKCYAIQAGREVRIIVDNVLVNDEKSILLARD
IAKKIEAEMRYPGKIKVTIIRETRVIEYAR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgacatatattattttttcttctatttttgctggctttatattaggatttttagtaaga
gtttttttaggtagattgtctttattagatttagaaaaaaatctgacaaaagtaagggta
gaatcacaattagagatagaaaatgaaagaaagcaaattattgctaatgcaaaatctcaa
atgcttaaagaaaaaaaccagcaagatagggatataagagatcggaaaaatgagattgtt
aatctagaaaaaagattgttacaaagagaagaaaccttagataagaggatatctgctctt
gataaacagcagtctagagttgattttaaaattaaagaatttgaacaaaaagaaaaagca
ataagagaaaaagaggcagatcttgttaaaagattggagaatatttctggtcttacaaga
gaagatgcaagaaaaattgtaattgaaaaagttgagcatgaatccagaagagatgctcaa
gttattattaataaaagcgaacaggaagcccagttattagcagataaagttgcaaaagat
attttagtatctactatgcagcgtattgttacagaggtaagctcggagtttacagtagct
tctgttgaattacctaatgacgagatgaaagggaggattataggtaaagaagggcgcaat
attagggctcttgaaactttaataggagctgatattattattgatgatactcctgaggct
gttgttatctcttgttttgatccaataagaaaagagcttgccaagaggactttagaaaga
cttgttacagatggcagaattcatcctgctaggattgaagaagttgtatataatgttacc
aatgagataaatagcattattcaagaagaaggcgagaaagtagtttttgatcttaatata
catggacttgataagaggcttattagagggttgggaaggctttattttagaagtagttat
ggtcaaaatgttttaagccattctaaagaaacggcaataataggagaaattttagctaaa
gagatgaaattagatcctattgtagtaaaaagagcatgtcttttacatgatattgggaaa
gggatggaaagtatttctgagaatagcgagggacacgctattactggtgctgaacttgct
caaagttgtggagagagcgaaattgttgttaatgccattgctgctcatcataatgaagta
aaacccgagagtcttgaggctattgttgttcaaatagcagatgccatttcagcatctcgt
cctggagcaaggcgggaaagtttaaataactacataaatagacttaaaagacttgaagat
attgcatatagttttgaaggtgttcaaaaatgttatgcgattcaagctggtcgtgaagtt
agaattattgttgacaatgtgttggttaatgatgaaaaatcaattttacttgcaagagac
attgctaagaagatagaagctgaaatgagatatcctggaaaaattaaagttacaattatt
cgcgaaactagagttattgaatatgcaagatag
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