Borreliella garinii BgVir: KK9_0866
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Entry
KK9_0866 CDS
T02048
Symbol
hrpA
Name
(GenBank) HrpA
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bgb
Borreliella garinii BgVir
Brite
KEGG Orthology (KO) [BR:
bgb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KK9_0866 (hrpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bgb03041
]
KK9_0866 (hrpA)
Enzymes [BR:
bgb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KK9_0866 (hrpA)
Spliceosome [BR:
bgb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
KK9_0866 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
WHD_HA2
AAA_22
nSTAND_NTPase5
AAA_19
Flavi_DEAD
T2SSE
Cas3-like_C_2
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AEW69157
LinkDB
All DBs
Position
linear:complement(872455..874926)
Genome browser
AA seq
823 aa
AA seq
DB search
MNDFKLPIYKYKDELIKVLKKNNVLIVESPTGSGKTTQLPRIIYEAGFAKLGKIGVTQPR
RIATISIAEYIAKHIGVNLGEEVGYKIRFEEITSPKTKIKLMTDGVLLQELKKDTLLYEY
DVIIIDEAHERSLNIDFILGLIKDISRKRDDFKIIISSATINTKIFSKYFNNAPVVSIET
IAYPVQIIYNPPLLNTSKGMILKIKEIVSNVIKEKKAGDILIFLSGEKEIKETIKELQEL
NSKKKLIICPLYGRMPKEAQEQIFVATPKNKRKIIVSTNIAETSITIENIKIVIDSGKVK
TNKFQTKTHTYSLQEVPISKSSATQRAGRAGRLSKGTCYRLYKREDYQLREDYQKEEIYR
TDLSEVILRMADIGIRDFTHFDFISKPSKHSIQTASKILKSLDAINNKNELTEIGKYMIL
FPLVPAHSRALVEAMINYPQAIYQTTIGLSFLSTSGIFLLPQNEEMEARQAHLKYKNPMG
DLIGFINIFEDFKKAANKEAFTKENYLDLKGLEEIVNVQMQLENIVSKFNIPIIQKSALD
NEGYLKSIMRGMRDYICFKTSKKKYKTIKAQNVIIHPGSLISTDSVKYFVAGEIIETTKM
YARSIGVLKKEWIDDLSLNEEFQHKNMHDKESQITNAKQTKIINEIKIGKKIFKAEFKNN
IYVIKISLEALKEMISKNELNTQNNEDLKKIKIQLIHKNVTVFSNKKFLETIEIVKGMGK
NWHCIKKYETNNVSIDEPENMKNLLESTMQFISSPSKKVALFLSLETDHLGNFRLKPKQN
FIMAIEESMESIKSLIENEEYIQKLHFIKKLINKVYKKLNYFF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttcaaactcccaatttataaatacaaagatgaattaattaaagtattaaaa
aaaaataatgttttaattgttgaaagtccaacaggcagtggaaaaaccacccaactgcca
agaataatatatgaagcgggttttgcaaaattaggaaaaattggagtaactcaaccaaga
agaatagccacaatatcaatagctgaatatattgcaaagcatattggtgtaaaccttgga
gaagaagttggttacaaaataaggtttgaagaaattacaagtccaaaaaccaaaatcaaa
ttaatgactgacggagtgttactgcaagagctaaaaaaagatacattgctttatgaatat
gacgtaatcataatagacgaagcacacgaacgaagtttaaacatcgattttatattaggt
cttattaaagacatttcaagaaaaagagacgattttaaaatcatcatttcatctgctaca
ataaacacaaaaatattttcaaaatatttcaacaatgcaccagttgttagcattgaaact
attgcatacccagtacaaataatatacaatccccctcttttaaacacatcaaaaggaatg
atattaaaaataaaagaaattgtctcaaacgtaataaaagaaaaaaaagcaggagatatt
cttatatttttatctggagagaaagaaataaaagaaactataaaagaattacaagaatta
aactcaaaaaaaaaattaataatatgccctttatacggtcgaatgcctaaagaagctcaa
gagcaaatatttgtagctactcctaaaaataaaagaaaaataatagtgtcaacaaacatt
gcagaaacttcaatcacaattgaaaatattaaaatagtaatcgatagcggaaaagttaaa
acaaataaattccaaacaaaaactcatacctattcgcttcaagaagttccaatttcaaaa
tcatcagcaactcaaagagccggtcgagcaggaagactttcaaaaggaacttgctacaga
ctttataaaagagaagattatcaactaagagaagattatcaaaaagaagaaatatataga
acagacttatctgaggtaatactaagaatggcggatattggaatcagagattttactcac
tttgattttatatcaaaaccatcaaagcattcgattcaaaccgcaagcaaaatattgaaa
tctctagatgccataaacaataaaaacgaacttacagaaattggaaaatatatgatacta
ttcccattagtgccagcacattcaagagcattagttgaagcaatgataaattacccacag
gcaatctatcaaactacaataggtctgtcatttttgtccacaagtggtatttttttacta
ccccaaaatgaagagatggaagccagacaagctcacttaaaatataaaaatccaatggga
gatttaattgggtttattaatatctttgaagattttaaaaaagctgcaaataaagaggct
ttcaccaaggaaaattatttagatctaaaaggacttgaagaaatagtaaatgtgcaaatg
caacttgaaaacattgttagcaaatttaatataccaataatacaaaaaagtgctcttgat
aacgaaggatatttaaaatcaataatgcggggaatgagggattatatttgctttaaaact
tcaaaaaagaaatataaaaccatcaaagcccaaaacgtaataattcatcccggatcactt
attagtaccgattctgttaaatattttgttgcaggagaaattatagaaactacaaaaatg
tatgcaagatccattggcgtcttaaaaaaagaatggattgatgatcttagccttaatgaa
gagtttcaacataaaaacatgcacgacaaagagagtcaaataacaaatgccaaacaaaca
aaaattatcaatgaaatcaaaatagggaaaaaaattttcaaagcagagttcaaaaataac
atctatgtaataaaaattagcctagaagcactaaaagaaatgatttcaaaaaacgaatta
aatactcaaaataatgaagatttgaaaaaaattaaaatacaattgatacataaaaatgta
acagttttcagtaataaaaaatttttagaaactatagaaatagtaaaaggcatgggaaaa
aattggcattgtataaaaaaatatgaaacaaacaatgtaagcattgatgaacctgaaaat
atgaaaaatcttttagagagcacaatgcagtttataagctctccctcaaaaaaagttgct
ctttttttatcattggaaacagatcacttgggaaattttagactaaaacccaaacaaaat
ttcataatggcaatagaagaatctatggaaagcataaaaagcctgatagaaaacgaagaa
tacatacaaaagctacattttataaagaaattaataaataaagtttacaaaaaattaaat
tactttttttaa
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