Borreliella garinii CIP 103362: BLA33_01230
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Entry
BLA33_01230 CDS
T04731
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgc
Borreliella garinii CIP 103362
Pathway
bgc03420
Nucleotide excision repair
bgc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLA33_01230
03430 Mismatch repair
BLA33_01230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgc03400
]
BLA33_01230
Enzymes [BR:
bgc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLA33_01230
DNA repair and recombination proteins [BR:
bgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLA33_01230
MMR (mismatch excision repair)
Other MMR factors
BLA33_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_12
UvrD_C_2
AAA_30
DEAD
ResIII
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
APQ14978
LinkDB
All DBs
Position
complement(268715..270691)
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AA seq
658 aa
AA seq
DB search
MPDDFFKNSLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLLRKGIAQKEILALT
FTNKAASEMKDRIKKILKSPLSNLMVSTFHAFGLFFLKENYKLLGYKKNFSIYDDNDRIS
LLKEILLDEGLLNKKVSLNSLSNAISLLKNGILTLNDLKEEDINIFKLYEERLRLYNSFD
FDDLILKPKELLSNNSDIRSKYSKRYRYVLIDEFQDTSLLQYNFIRLLINHSNLCCVGDD
DQSIYSWRGASYNNMLQFEKDYSAKEIKLEQNYRSAKNILDVANSVILNNKNRKEKTLWS
SKMCSKVIDVFVFEDEIQESEFVASQIIELSRIDGFKSKKIGVLMRTNALFRNVEMIFKR
QGIKYKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINVPRRGIGKEYLKKIRDI
ADKKGCCIYDALCDIVFSFTNTSTYNKALNKQVIESIEDFVSFIEEYQYKFSITKNTYSN
IIKEMIESIEYWGFLVNENPNSIKVAEYKYQNIEGFLSIIKNWESKQFGELRDLSSFLNY
IVLQSNEVSEESENININLMTVHSAKGLEFDYVFFIAVEDNIIPHHRIIEESEIGLEEER
RVFYVALTRAKDSLIITMANKRKKDRQIFDQLPSRFISEIPKEFLNFNYYADFIENKA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgatgatttttttaaaaattctctcaatcaatttcaatatgaagcggttaccact
attgagggtgctcttttaattattgctggtgctggcagtggaaaaacaagggttgttact
catagaatagcctatttgcttcgaaaaggcatcgctcagaaggaaattttagccttaact
tttactaataaggcggctagtgaaatgaaagatagaattaaaaaaattttaaaaagtcct
cttagcaatcttatggtctcaacttttcatgcttttggacttttctttttaaaagaaaat
tataaattgttaggatataaaaaaaactttagcatttatgatgataatgatagaatttct
cttcttaaagagattttacttgatgaaggtcttttaaataaaaaagtttctttaaattcg
cttagcaatgctatttcacttttaaaaaatggtatcctaacccttaatgatttaaaggaa
gaagatataaatatttttaaactttatgaagagcgattaaggctttacaattcttttgat
tttgacgatttaattttaaagccaaaagaattgttaagtaataattctgacattagaagt
aaatattctaaaagatataggtatgttttgattgatgagtttcaagatacttctttgctt
caatataattttattcgacttttaataaatcatagtaatttatgttgcgttggggatgat
gatcaatcgatatattcttggcgtggggctagctataacaatatgttgcaatttgaaaaa
gattacagcgctaaagaaataaagcttgaacaaaattatcgttctgcaaaaaatatttta
gatgttgccaattctgtgattttaaataataaaaatcgaaaggaaaagaccttatggtct
tcaaagatgtgtagcaaagttatagatgtttttgtgtttgaggatgagattcaagaatct
gagtttgttgcaagtcaaataatagagctttcaaggatagacggttttaaatctaaaaaa
ataggagttcttatgcgaactaatgccctttttagaaacgttgagatgatttttaaaaga
cagggcataaaatataaggtttcagggggaacatcttttttccagagaaaagaaataaag
gatattatttcttatttaaatgtaataataaatcctaaaagtgattatgatttgcttaga
atcataaatgttccaagaaggggaattggcaaggaatatttgaaaaaaattagagatata
gcagataagaaaggttgttgtatttatgatgctctttgtgatattgttttttcttttaca
aacacttctacttacaataaagctttaaataagcaggtcattgaaagtatagaagatttt
gtgtcttttattgaagagtatcaatataaatttagtataacaaaaaacacttattctaat
ataatcaaagaaatgatagaaagcattgaatattggggatttctggttaatgaaaatccc
aattcaattaaagtggctgagtataaatatcaaaatatagaagggtttttaagtataatt
aaaaattgggaatccaagcaatttggcgaattgagagatttaagcagttttttaaactat
atagttcttcaatctaatgaagttagtgaggaatctgaaaatattaatattaatttaatg
acagtgcattctgctaaaggtttagaatttgattatgtattttttattgctgttgaagac
aatattattccgcatcatagaataattgaagagagcgagattggtttagaggaggaaaga
cgagttttttatgttgcattaactcgtgcaaaagattctcttattattactatggccaat
aagcgaaaaaaagataggcaaatttttgatcagctgccttcaagatttatttcagaaatt
cctaaagaatttttaaattttaactattatgcagattttattgaaaataaagcttga
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