Borreliella garinii CIP 103362: BLA33_02370
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Entry
BLA33_02370 CDS
T04731
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bgc
Borreliella garinii CIP 103362
Pathway
bgc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLA33_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgc03021
]
BLA33_02370
03400 DNA repair and recombination proteins [BR:
bgc03400
]
BLA33_02370
Enzymes [BR:
bgc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLA33_02370
Transcription machinery [BR:
bgc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLA33_02370
DNA repair and recombination proteins [BR:
bgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLA33_02370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
APQ15182
LinkDB
All DBs
Position
503039..507172
Genome browser
AA seq
1377 aa
AA seq
DB search
MKEIKDFEKIKIKIASPDQIRNWSYGEVKKSETINYRTLRPEKDGLFCERIFGTTKEWEC
YCGKFKSIRYKGIICDRCNVEVTHFKVRRERMGHIELAAPVAHIWYYKYIPSRIGLLLDI
TASSLNSILYYEKYVVIEPGDTDLKKMQLLNEDEYIEARERYGMSFNASMGAEAIKTLLE
NLDLDELSSKLRIQMIDKDDKTDKKLLRRLEIIENFKISGNKPEWMIMEVLPVIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLRKLLLLNAPEIIVRNEKRMLQESVDSLFDNSH
KRKVVKGSSSRPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPAK
MALELFKPFVIRRLIESEAVFNIKRAKNLIEQEVDEVWQILDLVIKEHPILLNRAPTLHR
LGIQAFEPVLVEGKAIKLHPLVCHAYNADFDGDQMAVHVPLTPSAQAESWALMLSTNNLL
NPANGHPIVFPSQDIVLGLYYLTMEKKNTVGEGKKFLNFSNVILAINNRSLDYNASIYVK
IDGEYKKTTAGRVIFNEALPNGIEFVNKTLSDLELQILISKVYVVHGSSTVIEMLDIIKE
LGFKYATKFGCTISMSDIIVPNEKKTYIDRANKEIAKIQNDYAKGVITGEERYNNVVSVW
LKTNEELTNKMMEILKKDRDGFNVIYMMADSGARGSRNQIRQLAGMRGLMAKTSGDIIEL
PIISNFKEGLSVIEFFISTNGARKGLADTALKTADAGYLTRRLVDIAQDVVVRIEDCGTI
NGIKVETVKNGEEILESLKEKAVGSYSIERIKNPITGEIVLDANEEISEAKIELLEKIGI
EKLVIRSVLTCEAEHGVCQKCYGRDFSKNKPVNIGEAVGIIAAQSIGQPGTQLTMRTFHI
GGVAQAGSEDDKISLKNAFILNSIEGFNVNVDNGILFTRKGTLKIINVFYEEKIKNIKEI
KVSDSQRVIKGISLFVNKKGVEILSSYIGYAKLRDDKFLIVSEEQEVALKAGTKLEIGVG
DYVESGKVIGTFDPFAEPIIAEVKGKIKFKDIILGTTLKEEINTETGNVEKRITDNVFES
LDPRIFIIDSSGMEVASYVLPGDAYLQVEDGQNINIGDVIAKLSKGSEKTQDITGGLPRV
NDLFETRIPKNLTEMAKVSGIVQFKSIQKGKRLINILDEYGVEHKHYIPAGKHLLVRDGD
VVKAGDMLCDGRINPHDVLEILGGISLQEFLLAEIQDVYRKQGVSINDKHIGVIIKQMMK
KVKIVAVGDTNFVYGQKVDKHTFYEQNRKVIEQGGEPAIASPILIGVTKTSLNIDSFISA
ASFQETTKVLTDASIAGKIDDLRGLKENVVIGHLIPTGTGMGLYKKIKVSENIDAKV
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagataaaagattttgaaaaaataaaaattaaaatagcatctcctgatcaaatt
agaaattggtcttacggagaggttaaaaagtccgagactattaattatagaaccttaaga
cccgagaaggatgggcttttttgtgaaaggatttttggcactacaaaagaatgggaatgt
tattgcggtaaatttaaatcaattagatataaaggtattatttgtgatcgttgtaatgta
gaagttacccattttaaggtgagacgtgaaagaatgggacatattgagctagcagctcca
gttgcccatatttggtattacaaatatataccctctaggattggtcttttgcttgacatt
acagcatctagtttaaattctattctttattatgaaaaatatgtagtaattgaaccgggt
gatactgatcttaaaaaaatgcaacttttaaatgaagatgagtacatagaagctagagag
cgatatggaatgtcttttaatgcttcgatgggagctgaagctattaaaactcttcttgaa
aatcttgatcttgatgaactttcatctaagcttaggattcaaatgatagataaagatgat
aaaactgataagaaacttttaagacgtcttgaaattattgaaaattttaaaatttctggg
aataagccagaatggatgattatggaggttcttcctgttattcctccagagattaggcca
atggttcagcttgatggagggcgctttgcaacatctgatcttaatgatctttacagaaga
gttataaataggaataatcgtttaaggaagttacttcttcttaatgcgccagagattatt
gtgagaaatgaaaaaagaatgcttcaagaatcggtagattctctttttgataattctcat
aaaagaaaggttgtcaaaggctcatctagtagacctcttaagtcgctttccgatgcttta
aaaggtaaacagggaaggtttaggcaaaatcttcttgggaaaagagtagattattctggt
cgttctgttattgttgttggacctgagttaaagctgcatcaatgtggactacctgcaaaa
atggctcttgagctgtttaagccttttgtgataagaagattaattgagagtgaggctgtt
tttaatattaaaagagcaaagaatttaatcgaacaagaagtggacgaggtatggcaaatt
ttagatcttgttataaaagagcatcccattcttttaaatagggcgcctactcttcataga
cttggaattcaagcttttgagcctgtgttagttgagggtaaggcaataaaattacatcct
cttgtttgtcatgcgtataatgctgattttgatggtgatcaaatggcagtgcatgtcccc
cttactccatcagcacaagctgaaagttgggctttaatgctttcaacaaacaatctttta
aatcccgcaaacgggcatcctattgtttttccatctcaagatattgttttaggtctttat
tatttaacgatggaaaaaaagaatactgttggggaaggtaaaaagtttttaaactttagc
aacgttattctcgctataaataatagaagtctagattacaatgcttctatttatgtaaaa
attgatggcgaatacaaaaaaactacagccggtagggttatatttaacgaggctttgccc
aatggaattgaattcgtaaataaaactcttagtgatttggaactacaaattttaatatca
aaagtttatgtagttcatggttcttctactgtaattgaaatgcttgacattatcaaggag
cttggctttaagtatgccactaagtttgggtgcacaattagtatgagcgatattattgtt
cctaatgaaaagaaaacttatatagacagggctaataaagagattgctaaaattcaaaat
gattatgccaaaggtgttattactggtgaagagcgctataataatgtagtttctgtttgg
ttaaagactaacgaagaacttactaataagatgatggaaattttaaagaaagacagagat
ggatttaatgttatatatatgatggcagattctggtgctaggggtagtagaaatcaaata
agacagcttgctggtatgcgaggattaatggcaaaaacttctggggatattattgagctt
ccaattatttctaactttaaagaaggtctttctgtgatagagttttttatatctacaaat
ggagctagaaaaggtctagcagatactgctcttaagacagctgatgctggatatttaact
cgaagattagtagacattgctcaagatgttgttgtcagaatagaagattgtggaaccata
aatggaataaaagttgaaactgtcaaaaatggtgaagaaatattagaatctttaaaagaa
aaagctgttgggagctattccattgaaagaataaaaaatccaattactggtgagatcgtt
ttagatgcaaatgaagaaatctcagaagccaaaatagaattattagagaaaattggtatt
gaaaagcttgtgattagatctgttttaacatgtgaagctgagcatggtgtttgtcaaaaa
tgttatggtagagacttctcaaagaataagcctgtcaatattggcgaggctgtaggaata
attgctgctcagtctataggtcaaccaggaactcaattgaccatgagaacttttcatatt
ggtggagttgctcaggccggcagtgaagatgataaaatatctttaaagaatgcttttata
cttaatagtatagagggttttaatgttaatgttgacaatggaattcttttcacaagaaaa
ggaactttaaaaataatcaatgttttttatgaggaaaaaattaagaacataaaagagatt
aaagtttcagattctcaaagagtaatcaaaggaatttctttgtttgttaataaaaagggt
gtagagattctctcttcttatattggttatgctaaattaagagacgataaatttttaata
gtatcagaagagcaagaagttgctttaaaagctggcacaaagcttgaaataggggttggt
gattatgttgaatcaggtaaagttatcggtacatttgatccatttgcagagcctattatt
gcagaagttaaaggcaaaattaaatttaaggacattattttagggaccacccttaaagaa
gagattaatactgaaacaggaaatgttgagaaaagaattacagataatgtttttgaatct
cttgatcctaggatttttattattgatagtagtggtatggaggttgcatcttatgtatta
ccaggagatgcttatcttcaagttgaagatggtcaaaatattaatataggagatgttatt
gcaaaactttctaaaggctctgaaaaaactcaagatattacagggggattgcctcgtgtt
aatgatctttttgaaacaagaattcctaagaatttaactgaaatggctaaagtaagtgga
attgtgcaatttaaatcaattcaaaaaggtaaaagacttattaatattttagatgagtat
ggggttgaacataaacattatattccagccggtaagcatcttttggttagagatggagat
gttgttaaagcaggcgatatgctttgtgatggcagaattaatcctcatgatgtgcttgaa
attttaggcgggattagtttgcaagagtttctgttggcagaaattcaggatgtttatcga
aagcagggtgttagcattaatgacaaacatattggtgtgataattaaacaaatgatgaaa
aaggttaagattgtagcagttggtgataccaattttgtttatggacaaaaggtagataag
catactttttatgagcaaaatagaaaagtaatcgaacaaggtggtgagccagcaatagca
agtcctattcttataggagtaactaagacgtctcttaatatagattcttttatttctgca
gcttctttccaggaaacaacgaaagtattaacagatgcttctattgctggaaaaatagat
gatcttaggggattaaaggaaaatgttgtaattgggcatttaattcctactggaaccggt
atgggactttataaaaaaattaaagttagtgaaaatatcgatgctaaggtttaa
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