Borreliella garinii CIP 103362: BLA33_03025
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Entry
BLA33_03025 CDS
T04731
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bgc
Borreliella garinii CIP 103362
Pathway
bgc03410
Base excision repair
bgc03430
Mismatch repair
bgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BLA33_03025
03430 Mismatch repair
BLA33_03025
03440 Homologous recombination
BLA33_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgc03400
]
BLA33_03025
DNA repair and recombination proteins [BR:
bgc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BLA33_03025
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BLA33_03025
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BLA33_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Ubiquitin_3
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
APQ15306
LinkDB
All DBs
Position
complement(640479..642605)
Genome browser
AA seq
708 aa
AA seq
DB search
MKIWKQKETNIQIQELTCIAKQYNINPFEATLLIKREIKEEDFIFFLEDSTNLLHNPFLL
KDIDKFINRINKAIKENENILIFGDKDADGITATIIMYETLKDFGLNVSYKIPSNGEFYG
LSKELINMALEKKISLIITVDNGISSIEEINYANSKGIEIIITDHHLPSEDFKTENIVIN
PHLKDDKYPFKEIAGCCVSFKTCLALSMSFTDLYSKNLVFLFLEKTNNEIILNAIEIKNY
ILKQYLRLNNKNDPSINLNKLEKFIQNKCIVIFNKEDQGQLLNKHFGISININTIDISEN
FIKKYPNFRKKTLKDLIQATKYFRYKEVEIKDKLYYIFYNIIFETNKNLLQKCLKRLSFV
AIGTIADNMPIINENRIILKAGLKEIALRERMSINYLLKDANILTKPNITSMDIAYKIAP
ILNSTGRLEKADIAINFLLADDINQIENKFKEIKKINELRKYKEEKAWNSHNKNTIFKND
KFIVCYDKNTPKGISSRLATRLSAYYQKVAIFLTKQDNIIKGSIRSNNKINSKALISTIP
SHLIINSGGHKAAAGFTLNENLLEDFIKELEYATTKVKYETTDENKSILIDAIVPKNLTK
NSLFKTIEIFEPYGYEFREPILMMENVYLQELKTIDKNHSSKHINMRIKSQNDYYKAIFF
NGTKKIEELNIKENQYLDIIFTINEDFYCPREKILKIIDIKKSAQINV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttggaaacaaaaagaaactaatatacaaatccaagaattaacttgcattgct
aagcaatataatataaatccctttgaagcaactttgctcataaagcgagaaatcaaagaa
gaagatttcatatttttccttgaagacagcacaaatttactacacaatccatttttatta
aaagatatagataaatttataaacagaattaataaagcaattaaagagaatgaaaacata
ttaatctttggagataaagatgctgatggaatcacagcaacaataataatgtatgagact
cttaaagattttggacttaatgtaagttataaaataccttcaaatggagaattttatgga
ctttcaaaagaattaatcaacatggctttagaaaaaaaaatctctttaataataaccgtt
gataatggtatctctagtattgaagaaataaattatgcaaattcaaaaggaatagaaata
ataatcacagatcaccatcttccaagcgaagattttaaaactgaaaacatagttataaat
ccccacctaaaagatgataaatatccattcaaagaaatagcaggatgttgcgtaagtttt
aaaacttgccttgctcttagcatgtcctttacagatctttattctaaaaaccttgtattt
ttatttttagaaaaaacaaataatgaaattattcttaatgcaatagaaataaaaaactat
attttaaaacaatatctaagattaaataacaaaaatgacccttcaattaacctaaacaaa
ctagaaaaatttatacaaaacaaatgcatagtaatctttaacaaagaagatcaaggtcaa
ttattaaataaacacttcgggataagcataaatattaacacaattgatattagtgaaaat
tttataaaaaaatacccaaattttagaaaaaaaacattaaaagacttaatccaagcaact
aaatattttagatataaagaagttgagattaaagacaagctttactacatattttacaac
ataatttttgaaactaacaaaaatttgctccaaaaatgtctaaaaagacttagctttgtt
gcaataggaacaatagcagacaatatgcccattattaatgaaaacagaataatcctaaaa
gcagggcttaaagaaattgcactaagagaaagaatgtctattaattatctattaaaagat
gcaaacatattaacaaaaccaaatataacttcaatggatatcgcatataaaattgcacca
atactaaactcaacaggaagacttgaaaaagcagatattgcaataaattttttactagct
gacgacattaatcaaatagaaaataaatttaaagaaataaaaaaaatcaacgaactaaga
aaatataaagaagaaaaagcttggaattctcataataaaaatactatttttaaaaatgat
aaattcatagtttgttatgataaaaacaccccaaaaggaataagttcaagacttgcaact
agactttctgcttactaccaaaaagttgctatttttttaacaaagcaagataatattatt
aaaggatcaattagatcaaacaataaaatcaattcaaaagcattaatatcgacaatacct
tctcatttaataataaattcagggggacataaagctgccgctggatttacgctgaatgaa
aatttactcgaagactttattaaagaattagaatatgcgactacaaaagttaaatatgaa
actactgatgaaaacaagtcaatattaatagatgctattgttccaaagaatttaacaaaa
aattctctttttaaaacaatagaaatatttgaaccttatggctatgaatttagagaacca
atattaatgatggaaaatgtttaccttcaagaactcaaaacaattgacaaaaatcatagc
tcaaaacatataaatatgcgcattaaatcacaaaacgactactataaagctatttttttt
aacggaacaaaaaaaatagaagaattaaatataaaagaaaatcaatatttagacatcatt
tttacaatcaatgaagatttttactgcccgagggaaaaaattttgaaaattatagacata
aaaaagagcgctcaaatcaatgtataa
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