Burkholderia gladioli BSR3: bgla_1g02860
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Entry
bgla_1g02860 CDS
T01464
Name
(GenBank) DNA-directed RNA polymerase, subunit beta-prime
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bgd
Burkholderia gladioli BSR3
Pathway
bgd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
bgla_1g02860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgd03021
]
bgla_1g02860
03400 DNA repair and recombination proteins [BR:
bgd03400
]
bgla_1g02860
Enzymes [BR:
bgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
bgla_1g02860
Transcription machinery [BR:
bgd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
bgla_1g02860
DNA repair and recombination proteins [BR:
bgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
bgla_1g02860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
PYNP_C
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AEA58982
UniProt:
F2LHQ5
LinkDB
All DBs
Position
1:333147..337409
Genome browser
AA seq
1420 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIRDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTAVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNGKGEGMSFTGVSEVLRAYENK
EVELASRVNVRITEMVHNEDKSEGAPQFVPKISLYATTVGRAILSEILPAGLPFSVLNKP
LKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPTQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVVDRDGKQTR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETLYESGTLLDETAVEEIERLGIDEVRVRTALTCETRYGLC
AACYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GTVRFTATMRYVTNAKGEQIVISRSGEAMITDDLGRERERHKIPYGATLLQLDGDVIKAG
TQLATWDPLTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDANGEEVKIPNTEHSVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDAQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDRMIAEDKRPATYENILLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARRTKEV
SDRERFDQIAAEEAFEFGIPETPAADTPDAVESQQHPSAE
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaggaagaagtcttcgacgcgatc
aagatcggtctggcctcgccggacaagatccgttcctggtcgttcggcgaagtcaagaag
ccggaaaccatcaactaccgcaccttcaagccggagcgggatggtctgttctgcgcgaag
atcttcgggccgatccgcgactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagtgacgctcgccaaggtgcgccgcgag
cgcatgggccacatcgagctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgatatcgaacgcgtgctgtac
ttcgaagcctacgtggtgatcgaaccgggcatgacgccgctgaaggcgcggcagatcatg
accgaggaggattactacaacaaggtcgaggaatacggtgacgagttccgcgccgagatg
ggcgcggaaggcgttcgcgagctgctgcgcgcgatcaacatcgacgaacaggtcgagacg
ctgcgcaccgagctcaagaacaccggctccgaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtcctcgaggcattccagcgctcgggcatcaagcccgagtggatgatcctcgaa
gtcctgccggtgctgccgccggagctgcgtccgctggtgcccctcgacggcggccgtttc
gcgacctcggacctgaacgacctgtatcgccgcgtgatcaaccggaacaaccgtctgaag
cgtctgctcgagctgaaggcgccggagatcatcgtgcgcaacgaaaagcgcatgctgcag
gaagcggtcgattcgctgctcgacaacggtcgtcgcggcaaggcgatgacgggcgccaac
aagcgtccgctcaagtcgctggccgacatgatcaagggcaagggcggtcgtttccgtcag
aacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtgggcccgacg
ctgaagctgcaccagtgcggcctgcccaagctgatggcgctcgagctgttcaagcccttc
atcttcaacaagctcgaagtgatgggcgtggccaccaccatcaaggccgcgaagaaggaa
gtcgagaaccagacggcggtggtgtgggacatcctcgaagaggtgatccgcgagcatccg
gtgatgctgaaccgcgcgccgacgctgcaccgcctgggcatccaggcgttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcacccgctggtgtgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgtccacgtgccgctgtcgctggaagcgcagatggaagcg
cgcacgctgatgctggcctcgaacaacgtgctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctcggcctgtactacgcgacgcgcgaagccgtcaacggc
aagggcgagggcatgtccttcacgggcgtgtcggaagtcctgcgtgcgtacgagaacaag
gaagtcgagctggcctcgcgcgtcaacgtgcggatcaccgaaatggtccacaacgaggac
aagtcggaaggcgcgccgcagttcgtgccgaagatctcgctgtacgcgaccaccgtcggc
cgcgcgatcctgtcggaaatcctgccggccggcctgccgttctcggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgcctgatcaacaccgcgttccgcaagtgcggtctgcgc
gcgaccgtggtgttcgccgaccagctgatgcagtcgggcttccgtctcgcgacgcgcgcc
ggtatctcgatctgcgtggacgacatgctggtgccgacgcagaaggaaaccatcgtcggc
gatgccgcgaagaaggtgaaggaatacgaccgccagtacatgtcgggtctcgtcaccgcc
caggaacgctacaacaacgtggtcgacatctggtcggcgacgtcggaagcggtcggcaag
gcgatgatggagcagctctcgacggagccggtggtcgatcgcgacggcaagcaaacgcgt
caggaatcgttcaactcgatctacatgatggccgactcgggcgcgcggggttccgcggtc
cagatccgtcagctggccgggatgcgcggcctgatggcgaagccggacggctcgatcatc
gagacgccgatcacggcgaacttccgcgaaggcctgaacgtgttgcagtacttcatctcg
acccacggtgcacgtaagggtctggctgatacggcactgaagaccgcgaactcgggttac
ctgacgcgtcgtctggtcgacgtcacgcaggatctggtggtggtcgaggacgattgcggc
acgagtaacggcgtggccatgaaggccctggtggaaggcggtgaagtcgtcgaggcgctg
cgcgaccggattctcggccgcgtggccgtggccgacgtggtcaacccggaaacccaggaa
acgctgtacgaatcgggcaccctgctcgacgagacggcggtcgaggaaatcgaacgcctc
ggcatcgacgaggtgcgcgtgcgcaccgcgctgacctgcgaaacgcgttacggcctgtgc
gctgcctgctacggccgcgacctgggccgcggttcgctcgtcaacgtcggcgaggcggtc
ggcgtgatcgccgcgcaatcgatcggcgagccgggcacgcagctgaccatgcgtaccttc
cacatcggcggcgcggcttcgcgtgcggcggtggcttcgtcggtcgaggcgaagagcaac
ggcacggtccgcttcacggcgaccatgcgctacgtcaccaacgcgaagggcgagcagatc
gtcatttcgcgttcgggcgaggccatgatcaccgacgatctcggccgcgagcgcgaacgt
cacaagatcccgtatggcgcgacgctgctgcagctcgacggcgacgtgatcaaggccggc
acgcaactggccacctgggatccgctgacgcgcccgatcatcaccgagtacggcggtacg
gtgaagttcgagaacgtcgaggaaggcgtgacggtcgccaagcagatcgacgacgtgacg
gggctgtcgacgctcgtcgtgatcgacgtgaagcgccgcggctcgcaagcctcgaagagc
gtgcgcccgcaggtcaagctgctcgacgcgaacggcgaggaagtgaagatcccgaacacc
gagcactcggtgcagatcggcttccaggtcggcgcgctgatcaccgtgaaggacggccag
caggtgcaggtgggtgaagtgctcgcacgtatcccgaccgaagcgcagaagacgcgtgac
attaccggcggtctgccgcgggtggcggaactgttcgaggcgcgttcgccgaaggatgcc
ggcatcctggccgaagtcacgggtaccacctcgttcggcaaggacaccaagggcaagcag
cgcctggtcatcacggatctcgagggcaaccagcacgagttcctgatcgccaaggaaaag
caggtcctggtccacgatgcccaggtcgtcaacaagggcgaaatgatcgtggacggcccg
gccgatccgcacgacatcctgcgtctgcagggtatcgaggcgctgtcgcgctacatcgtc
gacgaggtgcaggacgtgtatcgtctgcagggcgtgaagatcaacgacaagcacatcgag
gtgatcgttcgccagatgctgcgtcgtgtgcagatcaccgacaacggcgatacgcgcttc
atcccgggcgagcaggtcgagcgttcggacatgcttgacgaaaacgatcgcatgatcgcg
gaagacaagcgtccggccacctacgagaacatcctgctgggtatcacgaaggcgtcgctg
tcgacggattcgttcatctcggcggcatcgttccaggaaacgacgcgcgtgctgacggaa
gcggcgatcatgggcaagcgcgacgatctgcgcggcctgaaggaaaacgtgatcgtcggc
cgtctgatcccggccggtaccggcctggcgttccacaaggcacgccggaccaaggaagtc
tcggatcgcgagcgtttcgaccagatcgcggcggaagaggccttcgagttcggtatcccg
gaaacgccggctgccgacacgcccgacgccgtcgagtcgcagcagcacccgagcgcggag
taa
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integrated database retrieval system
