Burkholderia gladioli BSR3: bgla_1g05490
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Entry
bgla_1g05490 CDS
T01464
Name
(GenBank) Ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bgd
Burkholderia gladioli BSR3
Brite
KEGG Orthology (KO) [BR:
bgd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bgd03016
]
bgla_1g05490
Enzymes [BR:
bgd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
bgla_1g05490
Transfer RNA biogenesis [BR:
bgd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
bgla_1g05490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AEA59242
UniProt:
F2L923
LinkDB
All DBs
Position
1:611093..613183
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AA seq
696 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMQQADAA
AQEIDLDFLWECAPDEEFAYGVLADEYFGSSYGPVERAALVLRMHGSPIYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQVGYEDELKAGRLPAAFEGKALALLTRPDKNSIEYKA
LDAAAIALGVSQARLMLDCGGIASPRALHEARFLAEHFPHGTGFPPVTVGPLPEDLPRAK
VDAFSIDDVTTTEIDDAFSVEHLPENRVRIGVHIAAPALGITRGDEVDAIARARLSTVYM
PGDKITMLPDDVVEVFTLKEGDFRPALSLYIIVDRETQDIVANETRAEYVFVKSNLRHNT
LDELVTEDTLAAGSGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHISITPRRRGSPLDLIVSELAILSNSTWGAFLHDHTVPGIYRSQRALGVPTGPKRTR
MQTSAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYA
VVQGFDDTYTAYADHQRRMEYFWCLRWLRQENRRQVVAAVVKGDLVRLEEVPLLLHVPGL
GVHARGTRVLLDVMSIDELTIEASVRLLNVLDAPTVSSGETAYEDEGAEEGADEAAGDDT
IVDAPDASAESEAEALAEADGEAAAPATGDSEENPK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtttttttcgaggaatcgggcagtttcaaggcaggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgccgggtggacggcgcgccaaggtgcgcgccaaggat
gtgctgatcgaattcgacaagcccgccgccggcgagctgatgcagcaggccgacgcggcc
gcgcaggagatcgacctggatttcctgtgggaatgcgcgccggatgaggaattcgcctac
ggcgtgctggccgacgagtacttcggcagcagctacggcccggtcgagcgcgcggcgctg
gtgctgcgcatgcacggctcgccgatctacttccgccgcaaggggcgcggccagtaccag
cgcgcgcccgaggagcaactgaagatggcgctcgcctcgctggagcgcaagcgccagcag
gcgctggtgcaggtcggctacgaggacgagctgaaggccggccggctgccggctgcgttc
gagggcaaggcgctggccctgctcacgcgcccggacaagaactccatcgagtacaaggcg
ctcgacgcggcggcgatcgcgctgggcgtctcgcaggcgcggctgatgctcgactgcggc
ggcatcgcctcgccgcgcgcgctgcacgaggcgcgtttcctggccgagcatttcccgcac
ggcaccggtttcccgcccgtcacggtgggcccgctgcccgaggacctgccgcgcgccaag
gtcgacgccttctcgatcgacgacgtgaccaccaccgagatcgacgatgccttctcggtc
gagcacctgcccgagaaccgcgtgcggatcggcgtgcacatcgcggcgccggcgctgggc
atcacgcgcggcgacgaggtcgacgcgatcgcgcgcgcccggctgtcgaccgtctacatg
cccggcgacaagatcaccatgctgcccgacgacgtggtcgaggtgttcacgctcaaggag
ggcgacttccgccccgcgctgtcgctctacatcatcgtcgatcgcgaaacccaggacatc
gtcgccaacgagacgcgcgccgaatacgtgttcgtgaagagcaacctgcgccacaacacg
ctcgacgagctggtcaccgaggacacgctggcggccggcagcggcgactacccgcacaag
gacgacatcgccgtgctctggccgctggcccaggcgctgttcgagaagcgccaggtggcg
cgcgccggctacggcctcaagcgcgaggtgcagcgcaataccgactacaacttctacgtc
gagggcgagcacatctcgatcacgccgcgccggcgcggttcgccgctcgatttgatcgtc
tcggagctggcgatcctctcgaactcgacctggggcgccttcctgcacgaccacacggtg
ccgggcatctaccgctcgcagcgcgcgctcggcgtgccgaccggccccaagcgcacccgc
atgcagacctcggccgcgccgcacgaggggctgggcgtggcgcaatacgcctggagcacc
tcgccgctgcgccgctacgtcgacctggtcaaccagtggcaactgctggcctgcgtgcag
cacggcgtgaccgccaagctggccgcgcccttcaagcccaaggacgcggatctctacgcg
gtggtgcagggcttcgacgacacctacacggcctacgccgatcaccagcgccgcatggag
tatttctggtgcctgcgctggctgcgccaggagaatcgccgccaggtggtcgccgcggtg
gtcaagggcgacctggtgcggctcgaggaagtgccgttgctgctgcatgtgccggggctc
ggcgtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgatcgacgagctgacc
atcgaggcctcggtgcggctgctcaacgtgctggacgcgccgaccgtgtcgagcggcgag
accgcctacgaggacgagggtgcggaggagggtgctgacgaggcggccggcgacgacacc
atcgtcgacgcgcccgacgcctcggccgagagcgaggcggaagcgctcgccgaggctgac
ggcgaggcagccgccccggccacgggagacagcgaggagaacccgaaatga
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