Burkholderia gladioli BSR3: bgla_1g11740
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Entry
bgla_1g11740 CDS
T01464
Name
(GenBank) Exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bgd
Burkholderia gladioli BSR3
Pathway
bgd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
bgla_1g11740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgd03400
]
bgla_1g11740
Enzymes [BR:
bgd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
bgla_1g11740
DNA repair and recombination proteins [BR:
bgd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
bgla_1g11740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEA59856
UniProt:
F2LB24
LinkDB
All DBs
Position
1:1302220..1305966
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AA seq
1248 aa
AA seq
DB search
MSAAMAASQAPQELDVFACALDGVNQIEASAGTGKTWNICALYVRLLLEHDLQADQILVV
TFTKAATAELHERIRGRLAQLAHALETGDDGGDPFVARLFETTLGEGSEGDDGGAIDAET
AAKRIRRALRGFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDAALRFELAAEFWR
TRVEPVAAAHPGFAAWLVAHRAGPEALDAQLARRLKKPLAALRFDGLPDPHAPGPDFDAA
LRASHAAAAALWQAERAAIASVLELAQASLNQRSHKPEAVADALAAWGAYFNEAAGALAP
AALPKPALKLTRGVLEKATKKGGATPEHPFFEAAEALEAALAAAEAAQRARWLALIADWL
AEAPARLAEKKRTRRVVSFDDLLANLYHALEAHPWLADTLRRRYPAALIDEFQDTDPLQF
AIFDRIFAPAGPLFLVGDPKQAIYSFRAADLHTYLAARERAGARYTLAVNQRSTPAIVEA
CNRVFGANPRAFVLDGLDYQPVRAGTRQRAPFVDGTDPRAGSGDFRIWMLPDGDQALGKR
DAQWQAAQACAAEIARLMRGAREGAVRLGEAALTPADIAVLVQTHRQGSIVKRVLAAWGI
GSVELAQASVFATLDAEQLERVLAAIDAPGDLRRLRAALATDWFGLDAAALWRLEQGEAA
PGAAADDADAMSWVERFSRYRLLWRERGFAVMWRSFARELRIAERLIGGADGERRVTDIN
HLAELTQARASAQPGIAPTLRWLAAQRAVGGGEDAQLRLESDRNLVQIVTVHKSKGLEYA
VVFCPFLNDGRLHEPREDALPDAREYHDEAGAAVLHYGCDEAAAELAATQARREQAAERA
RLVYVALTRAVHRCYLVAGVYQSARSTREARRSVLNWLVGGAGHGFDAWLETPPEAEELA
ASWRALATGPISIAPLPGVSARTPLAAGHDAERLGGARQAARFLRDAWRIASFSSLTASI
AREQEGIAAVPDEALRPDHDALAAAVDPVPRIDGGGERAMQPDPDDIVGFPRGAAAGECL
HLLFELSDFGDASGWDEAARRALHERPVEAEPELAKRLPAMMTRMLAEVVATELVPGMRL
AAIDPGRRLNEMEFLFPAAALDFAALRALLVEHGYPDVALESGTLAGFFKGFIDMIVEHD
GRFLIVDWKSNHLGATPDAYGPAALDAAMADHAYHLQALLYTVALHRYLRVRLPGYDYDS
HMAGYLYLFVRGVRPGWSSGGRPSGVHARRPSRELVEALDALMRKERA
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccatggctgcctcgcaggcgccccaggagctcgacgtcttcgcctgcgcg
ctggacggggtgaaccagatcgaggcctcggccggcaccggcaagacctggaacatctgc
gcgctctatgtgcgcctgctgctcgaacacgacctgcaggccgaccagatcctggtggtg
accttcaccaaggccgccaccgccgagctgcacgagcggatccgaggacggctcgcgcag
ctcgcgcacgcgctggagaccggcgacgacggcggcgatccgttcgtcgcgcgcttgttc
gagaccacgctcggcgagggcagcgagggcgatgacggcggcgcaatcgacgccgaaacc
gccgccaagcggatccgtcgcgcgctgcgcggcttcgaccaggcggcgatccacaccatc
cacgcgttctgccagcgcgcgctgcaggaagcgccgttcgcggccgccatgccgttcgcc
ttcgagatggaggccgacgacgcggcgctgcgcttcgagctggcggccgagttctggcgc
acgcgcgtcgagccggtggcggccgcgcatcccggcttcgcggcctggctggtcgcgcat
cgcgccgggccggaagcgctcgacgcgcagctcgcgcggcgcctgaagaaaccgctggcc
gcgctgcgcttcgacggcctgcccgatccgcacgcgccgggccccgacttcgacgcggcg
ctgcgggccagccacgcggcggcggccgcgttgtggcaggccgagcgcgcggcgatcgcc
agcgtgctggagctggcgcaggcttccttgaaccagcgctcgcacaagcccgaggcggtg
gccgacgcgctggccgcctggggcgcctatttcaacgaggcggccggcgcgctggcaccg
gccgccttgcccaagccggccctgaagctcacccgcggcgtgctggaaaaggccaccaag
aagggcggcgccacgcccgagcatccgttcttcgaggcggccgaggcgctggaggccgcg
ctggccgccgccgaggccgcgcagcgcgcgcgctggctggcgctgatcgccgactggctg
gccgaggcgccggcgcgtctcgccgagaagaagcgcacgcgccgcgtggtctccttcgac
gacctgctcgccaacctgtatcacgcgctcgaggcgcatccctggctcgccgacacgctg
cgccgccgctaccctgccgcgctgatcgacgagttccaggacaccgacccgctgcagttc
gcgatcttcgaccggatcttcgcgccggccgggccgctgttcctggtcggcgatccgaag
caggcgatctacagcttccgcgcggccgacctgcacacctacctggccgcgcgcgagcgg
gccggcgcgcgctacacgctggcggtgaaccagcgctcgacgccggccatcgtcgaggcc
tgcaaccgcgtgttcggcgcgaacccgcgcgccttcgtgctggacggcctcgactaccag
ccggtgcgcgccggcacgcggcagcgcgcgcccttcgtcgatggcaccgatccgcgcgcc
ggcagcggcgatttccggatctggatgctgcccgacggcgaccaggcgctgggcaagcgc
gacgcgcaatggcaggccgcgcaggcctgcgccgccgagatcgcgcgcctgatgcgcggc
gcgcgcgagggcgcggtgcgactcggcgaggccgcgctcacgccggccgatatcgccgtg
ctggtgcagacccaccggcagggcagcatcgtcaagcgcgtgctggccgcctgggggatc
ggcagcgtcgagctcgcgcaggcctcggtgttcgccacgctcgacgccgagcagctcgag
cgcgtgctggccgcgatcgatgcgccaggcgacctgcgccggctgcgcgcggcgctcgcc
accgactggttcgggctcgacgcggcggcgctgtggcggctggagcagggcgaggcggcg
cccggcgcggccgccgacgatgccgacgcgatgagctgggtcgagcgcttctcgcgctat
cgcctgctctggcgcgaacgcggtttcgcggtgatgtggcgcagtttcgcgcgcgagctg
cggatcgccgagcggctgatcggcggcgccgacggcgagcggcgcgtgaccgacatcaac
cacctggccgagctgacccaggcgcgcgcctcggcgcagcccggtatcgcgccgacgctg
cgctggctggccgcgcagcgtgcggtgggcggcggcgaggacgcgcaattgcggctcgaa
tcggatcgcaacctggtgcagatcgtcaccgtgcacaagtccaagggcctcgaatacgcg
gtggtgttctgtccgttcctgaatgatgggcgcttgcacgagccgcgcgaggatgccctg
cccgatgcgcgcgagtatcacgacgaggccggcgcggcggtgctccattacggctgcgac
gaggcggccgccgagctggccgccacgcaggcgcgtcgcgagcaggcggccgaacgcgcg
cggctggtctatgtcgcgctcacgcgcgcggtgcatcgctgctacctggtggcgggcgtc
taccagtcggcgcgttcgacgcgcgaggcgcgccgcagcgtgctgaactggctggtcggc
ggcgccggccacggcttcgacgcctggctcgagacaccgcccgaggccgaggagctggcc
gcgagctggcgcgcgctggccaccggcccgatctcgatcgcgccgctgccgggcgtgagc
gcacgcacgccgctggcggccggccacgatgccgaacggctcggcggcgcgcgccaggcc
gcgcgctttttgcgcgacgcctggcgcatcgccagcttcagctcgctgacggcctcgatc
gcgcgcgagcaggaaggcatcgcggccgtgcccgacgaggcgctgcgtcccgatcacgat
gcgctcgccgccgccgttgatccggtgccgcgcatcgacggcggcggcgagcgcgccatg
caacccgatcccgacgatatcgttggtttcccgcgtggcgcggcggccggcgagtgcctg
cacctgctgttcgagctgagcgacttcggcgacgcgagcggctgggacgaagccgcgcgg
cgcgcgctgcacgagcggccggtggaagccgagcccgagctggccaagcggctgcccgcg
atgatgacgcgcatgctggccgaggtggtcgccaccgagctggtgcccggcatgcgactc
gccgcgatcgatccgggccggcgcctgaacgagatggagttcctgttcccggccgccgcg
ctcgatttcgcggcgctgcgtgcgttgctggtcgagcacggctatcccgacgtggcgctc
gaatcgggtacgctcgcgggtttcttcaagggcttcatcgacatgatcgtcgagcacgac
ggccgcttcttgatcgtcgactggaagtcgaaccatctcggcgcgacccccgacgcctat
gggccggccgcgctcgatgcggcgatggccgaccacgcctatcacctgcaggcgctgctc
tataccgtcgcgctgcatcgctacctgcgcgtgcgtctgcccggctacgactacgacagc
cacatggccgggtatctctacctgttcgtgcgcggcgtgcgtcccggctggtcgagcggc
ggacggccctcgggcgtgcatgcccggcggccctcgcgcgagctggtcgaggcgctcgac
gcgctgatgcgcaaggagcgcgcatga
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