Burkholderia gladioli BSR3: bgla_1g23060
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Entry
bgla_1g23060 CDS
T01464
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bgd
Burkholderia gladioli BSR3
Pathway
bgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bgla_1g23060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgd03021
]
bgla_1g23060
03019 Messenger RNA biogenesis [BR:
bgd03019
]
bgla_1g23060
Transcription machinery [BR:
bgd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
bgla_1g23060
Messenger RNA biogenesis [BR:
bgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
bgla_1g23060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEA60933
UniProt:
F2LCQ2
LinkDB
All DBs
Position
1:2650076..2651338
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AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPDILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaattgatcgaaatggccaatggt
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgttcgccattctaaaa
aagcgcgccaagacgggcgagacgattttcggcgatggcacgctcgaagtcctgccggac
ggcttcggcttcctgcgctcgccggaaatgtcctacctcgcgagcacggacgacatctat
atcagcccgtcgcagatccgccgcttcaacctgcacaccggcgacaccatcgaaggtgaa
gtgcgcacgccgaaggacggcgagcgctatttcgcgctggtgaaggtcgacaaggtgaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctttcgctcgaacgcgaaatgcgcggcgaggaaaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctggtggcctcgccg
aagtcgggcaagacggtcatgctccagcacatcgcgcacgccatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccctgaagaagtgaccgaaatgcag
cgttcggtggcgggcgaagtgatcgcctcgaccttcgacgaaccggccacgcgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctggtggaaatgaagcatgacgtg
gtgatcctgctggactcgatcacgcgcctggcccgtgcctacaacaccgtgatcccggct
tcgggcaaggtgctcacgggcggtgtcgacgccaacgcgctgcagcgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggttcgctgaccatcatcggcacggccctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaggaaatgctgatcaagccggacatcctccaaaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaagcgatggaattcctgctc
gacaagattcgccagaccaagagcaattcggagttcttcgacctgatgcgccgtggcggc
tga
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