Burkholderia gladioli BSR3: bgla_1g24890
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Entry
bgla_1g24890 CDS
T01464
Name
(GenBank) predicted DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bgd
Burkholderia gladioli BSR3
Pathway
bgd03420
Nucleotide excision repair
bgd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bgla_1g24890
03430 Mismatch repair
bgla_1g24890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgd03400
]
bgla_1g24890
Enzymes [BR:
bgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bgla_1g24890
DNA repair and recombination proteins [BR:
bgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bgla_1g24890
MMR (mismatch excision repair)
Other MMR factors
bgla_1g24890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_22
AAA_30
AAA_16
nSTAND3
SLFN-g3_helicase
AAA_29
TIP49
AAA
AAA_25
DEAD
Arc
IstB_IS21
T2SSE
ATPase
Zeta_toxin
AAA_11
AAA_18
NTPase_1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEA61113
UniProt:
F2LFE7
LinkDB
All DBs
Position
1:2869878..2871611
Genome browser
AA seq
577 aa
AA seq
DB search
MALVICAQRQSILDENGAILVTGGPGSGKTTIALAKARLVIERGLSPGQSVLFLSFSRAA
VARVAEASKTQLPTALQGKLSIQTFHSLFWRILQAYGYLLGAPRSLRLLMPHDEAAMRHE
FESNGGDWNVERERLFRETGRVAFDLFAPKAHELLSRSARLRELFSSCYPLIVVDEAQDT
AEDQWQCVRLLSAGTQMMCLADLDQQIYDFRPGVSSDRVTHIMAALQPLRVDLAGENHRS
PNSEIVAFANDMLLNTPRGAAYRGVSRMNYRANREYRDRAIRQAIGIAIQRAKEAAQGDI
ESLAVLATWGRGVNVISRALTGDGTNLIPHRVMIDEASVLLSSRMVAFMLEPRRPVAEEL
LDLADGLDLAAMVFRARGGNTNLATAQRLAASAVQSRGGTSPRANGVASKLLAAVRLLRT
HEFTGDPKRDWLDARSILRNAGANPFQAIAEDAEQLVAFQRGRRISAALTELWQTQGAYL
NARGALDAAIAEDQLLSGGNDLRGIHVMTIHKSKGKEFDAAIIFDDPNSSPLLFTQEVAP
HPRCRKLVRVGITRARHHVLMLCDMFTPTALLQGHQL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtggccctggtcatctgcgcgcagcgacagagcattctcgacgagaacggcgcgatcctc
gttacgggaggcccaggcagcggcaagacgaccatcgctttggctaaggccagactcgtc
atcgaacggggcctctcacctggtcaatctgttctgtttctcagcttctcgcgtgctgct
gtagcgcgcgtcgccgaagcgagcaagacgcagttgcctaccgccctgcaaggaaagctc
tcaatccagactttccactcgctcttctggcgcatcttgcaggcttatggatacctgctg
ggcgcaccgagatcgctgcgtctgctgatgcctcacgatgaggcagccatgcggcacgag
ttcgagagcaatggcggtgactggaacgtcgagcgcgaacggctatttcgggaaacaggg
agagtcgcatttgacctgttcgctccgaaggctcacgaattactgtctcgaagcgcacgc
ttgcgcgagttgttttcgtcgtgttatccgttgatcgttgtagatgaggcgcaggacacc
gcggaagatcaatggcagtgtgttcgactgctatccgctggcacacaaatgatgtgcctc
gctgacctagatcagcaaatctacgacttccgaccgggtgtcagctcggaccgggtgacg
cacatcatggccgccttacaaccgctgcgcgtggatctggctggcgagaatcaccgaagt
cctaattcggaaatcgtcgccttcgccaacgacatgctattgaacacaccaagaggtgcg
gcgtaccgaggtgtatcacggatgaactatcgcgctaaccgagagtaccgtgaccgggcg
atccgccaagcaatcggcattgccattcaacgtgcaaaggaagccgcccaaggcgacatc
gagagtctggccgtacttgcaacatggggtcgcggtgtcaacgtcatctcccgtgccctg
actggcgacggcacgaatttgatcccgcaccgagtgatgatcgacgaagcatcagtgctg
ctttcgagtcgcatggtggcgtttatgctggaaccgcgcaggcccgtagcagaggaactt
ctggacttggccgatggactcgaccttgctgcgatggttttccgggcacgcggcggaaat
accaatctagccaccgcacagcggttggcagcaagtgccgtacaaagccgcggcggcact
tccccacgcgctaacggagtggcatccaagctcctagccgcagtgcgtttattgcgcacc
cacgaattcactggcgacccgaagcgggattggctagatgcgcgcagcatccttcgcaat
gctggtgccaacccgtttcaagctatagcagaggatgccgaacagcttgtcgcgttccag
cgtggccgccgtatctcagcagcactaaccgaactctggcaaacgcagggagcatatcta
aatgcgcggggcgcactcgacgctgccatagctgaagatcagctcttgtcgggtggcaat
gacttgaggggcatccacgtcatgaccattcacaagtcgaaaggcaaggagttcgacgca
gcaatcatcttcgatgacccgaacagcagtcctctgcttttcactcaagaggttgcgcct
caccctcgttgtcgcaaactggtgcgagttggtatcacccgtgccagacatcatgtgctg
atgctttgcgatatgttcactccaaccgccttactgcaagggcatcaactctag
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