Burkholderia gladioli BSR3: bgla_1g30000
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Entry
bgla_1g30000 CDS
T01464
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bgd
Burkholderia gladioli BSR3
Pathway
bgd03030
DNA replication
bgd03430
Mismatch repair
bgd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bgla_1g30000
03430 Mismatch repair
bgla_1g30000
03440 Homologous recombination
bgla_1g30000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bgd03032
]
bgla_1g30000
03400 DNA repair and recombination proteins [BR:
bgd03400
]
bgla_1g30000
Enzymes [BR:
bgd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bgla_1g30000
DNA replication proteins [BR:
bgd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bgla_1g30000
DNA repair and recombination proteins [BR:
bgd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bgla_1g30000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AEA61611
UniProt:
F2LEX4
LinkDB
All DBs
Position
1:complement(3407779..3411318)
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AA seq
1179 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRLDDLVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GVKPIAGCDVWITNHDDRDKPSRLLLLVRDKAGYLNLCELLSKAWLTNQYRGRAEVDAQW
LESELGQGLLALSGAQQGDIGIALAAGNAEAARRHAQRWARVFPGGFYIELQRYGQPGGE
AYVQEAAKLAAELQLPVVATHPLQFMGDEDFTAHEARVCISEGDILANPRRQKRFTIEQR
FRTQAEMAELFADIPSAVQNTVEIAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSQE
GLEKRLVQLFPDEAERDAQRATYYQRLEFECNTIKKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYSLGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPLLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYAQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERFIRRLDPAKADWSLAQVPLDDPASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMVKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCELNGLKVLPPDINQSEYRFEPVAEADGKRSKTIRYGLGAVK
GSGQNAIEEILRARKEGGAFKDLFDFCERIDRRLVNRRTVEALIRAGAFDVLTPNRAQLI
ASVPLAMEAADQAEANAMQAGLFDMGAESPHAHALVDEPAWDEKRRLQEEKGALGFYLSG
HLFDAYREEVRRFARMKLGELKEGRDKLVAGVIASLRTQMTQRGKMIIALLDDGTGQCEI
TVFNEQFDANRGLFKEDELLIVQGQARNDAFTGGIRFTAEAVMDLERARSRYAQAVRMTM
NGNADAAALRRVLEPHVAKAEPAPAVAAPAPSRGGREGRDGGRRAPMPMPNGLAVQILYN
NARAQGEMRLGDAWRVKPSDTLLAELRAIFGDGTVEIAY
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgtttcgtccatcttcgcgttcactccgaattctcgattgccgacggc
atcgtgcgcctcgacgacctggtcaaggcggcggccgccgacggtcagggcgcgctcgcc
ctcaccgatctcggcaatgcattcggtctcgtccgtttctaccaggaagcccgcggcaag
ggtgtcaagccgatcgccggctgcgatgtctggatcaccaaccacgacgatcgcgacaag
ccctcgcgcctcttgctgctggtgcgcgacaaggccggctacctgaatctctgcgagctg
ctctcgaaggcctggctcaccaaccagtatcgcggccgcgccgaagtcgacgcgcaatgg
ctcgaatccgagctcggccagggcctgctggcgctgtcgggcgcgcagcagggcgatatc
ggcatcgcgctggcggccggcaacgccgaggccgcgcgccgccatgcgcagcgctgggcc
cgcgtgttcccgggcggcttctatatcgagctgcagcgctacggccagcccggcggcgag
gcctatgtgcaggaggccgccaagctcgcggccgagctgcagctgccggtggtcgccacg
catccgctgcagttcatgggcgacgaggatttcacggcgcacgaggcgcgtgtctgcatc
tcggaaggcgacatcctcgccaacccacgccgccagaagcgcttcaccatcgaacaacgc
ttccgcacccaggccgagatggccgagctgttcgccgatatcccctcggcggtgcagaac
acggtcgagatcgccaagcgctgcaacctcaagctcgagctcggcaagcccaagctgccg
ctgttcccgacgccggacggcatgtcgctcgacgactacctggtccagctctcgcaggaa
gggctcgagaagcgcctggtgcaactgttccccgacgaggccgagcgggacgcgcagcgc
gcgacctactaccagcgcctcgaattcgaatgcaacacgatcaagaagatgggcttcccc
ggctacttcctgatcgtggcggacttcatcaactgggccaagaacaacggcgtgccggtc
ggcccgggccgcggctcgggcgcgggctcgctggtggcctattcgctgggcatcaccgat
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaatcccgagcgggtctcg
atgcccgacttcgacatcgacttctgccagcacggccgagatcgcgtgatccagtacgtg
aaggagaagtacggcgccgacgcggtctcgcagatcgccaccttcggcaccatggccgcc
aaggcggccgtgcgcgacatcgggcgcgtgctcgacctcggctacatgttcaccgacggc
gtggccaagctgatcccgttcaagccgggcaagcacgtcaccatcgccgacgcgatgaag
gaagagccgctgctgcaggagcgctacgacaacgaggacgaggtccatcagctgctcgat
ctcgcgcagcgtgtcgagggcctcacgcgtaacgtcggcatgcacgccggcggcgtgctg
atcgcgccgggcaagctgaccgatttctgccccttgtacgcccaaggcgacgacggtggc
gtggtcagccagtacgacaaggacgacgtcgaagcggtcgggctggtgaagttcgacttt
ctgggcctgaccaccctcaccatcctcgactgggccgagcgcttcatccgccggctcgat
ccggccaaggccgactggtcgctggcccaggtcccgctcgacgatcccgcctcgttccag
atcctcaagaaagcgaacacggtcgccgtgttccagttggaaagccgcggcatgcagggc
atgctgaaggacgcccagcccgaccgcttcgaggacatcatcgcgctcgtgtccttgtac
cggccgggcccgatggacctgatcccgagcttctgcgcccgcaagcacggccgcgagaag
gtggagtacccggatccgcgcgtcgagccggtcctgaaagagacctacggcatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctgggcggcgcc
gatctcttgcgtcgcgcgatgggcaagaagaagcccgaggagatggtcaagcaccgcgag
atcttcgccgagggcgccgcgaagaacggcctcacgcgcgagaagtcggacgagatcttc
gacttgatggagaagttcgcgggttacggcttcaacaagtcgcacgcggccgcctacgcg
ctgctcgcctactacaccgcctggctgaaggcgcatcatcccgccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcgag
ctcaatggcctgaaggtgctgccgcccgacatcaaccagtccgaataccgcttcgagccg
gtcgcggaagccgatggcaagcgctcgaagacgatccgctacggcctgggcgccgtcaag
ggcagcggccagaacgcgatcgaggagatcctgcgggcgcgcaaggaaggcggcgcgttc
aaggacctgttcgatttctgcgaacggatcgaccgccgcctcgtcaaccgccgcaccgtg
gaggcgctgatccgcgccggcgccttcgacgtgctgacgccgaaccgcgcgcagctgatc
gcctcggtgccgctcgccatggaagcggccgatcaggccgaggccaacgcgatgcaggcc
ggcctgttcgacatgggcgccgagtcgccgcacgcgcatgcgctggtggacgaaccggcc
tgggacgagaagcgtcgtctgcaggaggaaaagggcgcgctcggtttctacctgtcgggg
cacctgttcgacgcctatcgcgaggaagtccgccgtttcgcgcggatgaagctcggcgag
ctgaaggaagggcgcgacaagctggtggccggcgtgatcgcctcgctgcgcacccagatg
acgcaacgcggcaagatgatcatcgcgctgctagacgacggcaccggccagtgcgagatc
acggtgttcaacgagcagttcgacgcgaaccgcggcctgttcaaggaagacgaactgctg
atcgtgcagggccaggcgcgcaacgacgcgttcacgggcgggatccgcttcacggccgaa
gcggtgatggatctcgagcgcgcgcgcagccgctacgcgcaggccgtgcgcatgaccatg
aacggcaatgccgacgcggccgcgctgcgtcgcgtgctggagccgcatgtggccaaggcc
gaacccgcgccggccgtcgcggcaccggcgccgtcccgcggcgggcgcgagggacgcgat
ggcggccgccgcgcgccgatgccgatgcctaacgggctggctgtgcagatcctctacaac
aacgcgcgcgcgcagggcgagatgcggttgggcgatgcctggcgcgtcaagccgagcgat
acgctgctggccgagctgcgcgccatcttcggcgatggcacggtggaaatcgcctactga
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