Burkholderia gladioli BSR3: bgla_1g33920
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Entry
bgla_1g33920 CDS
T01464
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgd
Burkholderia gladioli BSR3
Pathway
bgd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bgla_1g33920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgd03019
]
bgla_1g33920
Enzymes [BR:
bgd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
bgla_1g33920
Messenger RNA biogenesis [BR:
bgd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
bgla_1g33920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
CMS1
HI1480
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AEA61995
UniProt:
F2LAJ2
LinkDB
All DBs
Position
1:3852856..3854373
Genome browser
AA seq
505 aa
AA seq
DB search
MSFASLGLAEPLVRAVNELGYTEPTPIQTQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLNASTAAQAGGKRAVRALILTPTRELAAQVEESVRAYGKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDVSQLDILVLDEADRMLDMGFIHDIKRVLARLPA
KRQNLLFSATFSDEIKALADSLLDSPALIEVARRNTTAETIAQKIYPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLGKDGISALAIHGNKSQSARTRALTEFKAGTLQVL
VATDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGANGEAVSLVCVDEKQLLRD
IEKLIKREIPQEVIAGFEPDPNAKPEPIQRRGQQQQRGGGGGGGGGGGGGARQPQGQGRG
QGAARRDGAQPGGAKPAAKPAAKAAPKPAAKPVKAGGGGGAATAAKPRPAGGGRPGGGQG
GNGGGNANAGHANRNRSSRSGQRGH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcttccctcggcctcgccgaacccctcgtgcgggccgtcaacgaactcggc
tataccgaaccgaccccgatccagacccaggcgatccccgccgtgctcggcggcggcgac
ctgctcgccggcgcccagaccggcaccggcaagaccgccggcttcaccctgccgatcctg
cagcgcctcaatgcaagcaccgccgcgcaggccggcggcaagcgcgccgtgcgcgcgctg
atcctcacgccgacgcgcgaactggccgcccaggtcgaggagagcgtgcgcgcctacggc
aagtacctgaagctgcgctcgaccgtgatgttcggcggcgtgagcatcaatccgcagatc
gatgcgctcaagcgcggcgtggacatcgtggtggcaacgccgggccgcctgctcgaccac
atgcagcagaagaccatcgacgtctcgcagctcgacatcctggtactcgacgaagccgat
cgcatgctcgacatgggcttcatccacgacatcaagcgggtgctcgcgcgcctgcccgcc
aagcgccagaacctgctgttctcggcgaccttctccgacgagatcaaggcgctggccgac
agcctgctcgactcgccggccctgatcgaggtagcgcgccgcaacaccacggccgagacc
atcgcgcagaagatctacccggtcgaccgcgaccgcaagcgcgagctgctcacccacctg
atccgcgagcacaactggttccaggtgctggtgttcacgcgcaccaagcacggcgccaac
cgcctggccgagcagctcggcaaggacggcatcagcgcgctggcgatccacggcaacaag
agccagtcggcccgcacgcgcgcgctgaccgagttcaaggccggcacgctgcaggtgctg
gtggccaccgatatcgccgcgcgcggcatcgatatcgaccagttgccacacgtggtcaac
tacgagctgccgaacgtgccggaagactacgtgcaccgcatcggccgaaccggccgcgcg
ggcgccaacggcgaggcggtctcgctggtctgcgtcgacgagaagcaactgctgcgcgac
atcgagaagctgatcaagcgcgagatcccgcaggaagtgatcgccggcttcgagcccgat
ccgaacgccaagccggaaccgatccagcgccgtggccagcaacagcagcgcggcggcggg
ggcggcgggggcggcgggggcggcggcggcgctcgccagccgcaaggccaggggcggggg
caaggcgcggcgcgccgtgacggcgcccagccgggcggcgcgaagccggccgccaagccg
gcggcgaaagcggcgcccaagcctgccgcgaagccggtcaaggccggcggtggtggcggc
gccgcaaccgcggccaagccgcgtccggcaggcggcggccgaccgggcggtggccagggc
ggcaacggcggcggcaatgccaatgcggggcacgcgaaccgcaaccgctcctcgcgcagc
ggccagcgcggccactga
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