Paraburkholderia atlantica CCGE1002: BC1002_0002
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Entry
BC1002_0002 CDS
T01217
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03030
DNA replication
bge03430
Mismatch repair
bge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BC1002_0002
03430 Mismatch repair
BC1002_0002
03440 Homologous recombination
BC1002_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bge03032
]
BC1002_0002
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_0002
Enzymes [BR:
bge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BC1002_0002
DNA replication proteins [BR:
bge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BC1002_0002
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BC1002_0002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ADG14116
LinkDB
All DBs
Position
1:2447..3550
Genome browser
AA seq
367 aa
AA seq
DB search
MQLVKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF
GVGGDSVATTVAARKLLDILRAMPDGQVTLTLNDKRLTVQSGKSRFALQTLAADEFPTVA
QAKDYGASLVVPQKTFRQLLGMVHFSMAQQDIRYYLNGMLLVVDGDQLMAVATDGHRLAF
SSMKIEGSFARQEVIIPRKTILELQRLLEDIDDTLNIDIAQTQVKFTFGQVELVSKLVEG
KFPDFQRVIPKSHKNKFQIGREELQRSLQRAAILTSDKFKGVRCIVEPGQLKIMSTNADQ
EEAQEELEIAYDGDSVDIGFNVTYLLDVLANLKVDMLQVSLGDASSSALITIPENDEFKY
VVMPMRI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggtcaagaccgaacgcgacaacctcctcaggccgctgcaaaccgtgagcggc
atcgtcgaacgccgccatacgttgccgatcctcgccaatttgctgatcaccaagaacggt
cctgacgtatcgttcctgtcgaccgacctcgagttgcagatcaccacgcgcgccgatttc
ggcgtcggcggcgattcggtcgcgaccacggtggcggcgcgcaagctcctcgacattctg
cgcgcgatgcccgacggccaggtcacgctgacgctgaatgacaagcgcctgaccgtgcaa
tccggcaagagccgctttgcgctgcaaacgctcgcggcggacgaattcccgaccgttgct
caggctaaagactacggcgcgagcctcgtggttccgcaaaagaccttccgccagctgctc
ggcatggtccatttctcgatggcccagcaggacatccgctactacctgaacggcatgttg
ctggtggtggacggcgaccagctgatggcggtcgcaacggacggccaccgtctcgcgttc
tcgtcgatgaagatcgagggctcgttcgcgcgccaggaagtgatcattccgcgcaagacg
attctcgagctgcagcgcctgctcgaagacatcgacgacacgctgaacatcgacatcgcg
cagacgcaggtcaagttcacgttcggccaggtcgaactcgtgtcgaagctcgtggaaggc
aagttccccgacttccagcgcgtgattccgaagtcgcacaagaacaaattccagatcggc
cgtgaagaactgcaacgctcgctgcaacgcgcggcgattctgacgtcggataagttcaag
ggcgtgcgctgcatcgtcgagccgggccagttgaagatcatgtcgaccaacgccgatcag
gaagaggcacaggaagaactggaaatcgcatacgacggcgacagcgtcgatatcgggttc
aacgtcacgtatctgctcgacgtgcttgcgaacctgaaggtcgacatgttgcaggtgagc
ctgggtgatgccagctccagcgcgttgatcacgattcccgagaacgacgaattcaagtac
gtggtgatgccgatgcgcatctga
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