Paraburkholderia atlantica CCGE1002: BC1002_0315
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Entry
BC1002_0315 CDS
T01217
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BC1002_0315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_0315
Enzymes [BR:
bge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
BC1002_0315
DNA repair and recombination proteins [BR:
bge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BC1002_0315
Prokaryotic type
BC1002_0315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
HHH_5
DUF6083
HHH_8
RecR_HhH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADG14422
UniProt:
D5WB93
LinkDB
All DBs
Position
1:339413..340546
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AA seq
377 aa
AA seq
DB search
MPSRLTPTTAVRSSTSDATPAFTPMPDFSARLIAWQRQHGRHDLPWQSTRDPYRIWLSEI
MLQQTQVSTVIPYYAKFLGRFPDVAALAAAPSDDVMALWAGLGYYTRARNLHRCAQVVVE
RHGGAFPVSVDELAELPGIGRSTAAAIASFAFGARATILDGNVKRVLARVFGVEGFPGEK
KVENSMWTLAESLLPSNASNAEVSAYTQGLMDLGATLCVRGKPDCTRCPFAPDCVANVTG
RQRELPTARPKKAVPTRRTWMLVLRDGNAVMLERRPPSGIWGGLWSLPEAADEATLAERA
RAFGSDGEVSALASFSHVFTHFKLDIEPRLAELDRDVGALAALNDADTAWVALSDLDSFG
VPAPVRKLLASLHGSLI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccgcctgactccaacgaccgccgtgcgctccagcacgtccgacgccacgccc
gcattcacgccgatgcccgatttttccgcgcgcctgatcgcgtggcagcgccagcatggc
cgccacgatctgccgtggcagagcacgcgtgacccgtatcggatctggctgtccgaaatc
atgctgcagcagacccaggtctcgacggtaattccctactacgcgaaatttctcgggcga
ttcccggatgttgccgcgctcgccgcggcgccgtccgatgacgtgatggcgctgtgggcc
ggcctcggctactacacgcgcgcgcgcaatctgcatcgctgcgcccaggtcgtcgtcgag
cggcatggcggcgcgtttccggtctcagtcgatgaactcgccgaactgcccggcattggc
cgctcgacggccgcggcgatcgcgtcgttcgcgttcggcgcgcgcgcgacgattctcgat
ggcaacgtcaagcgcgtgctcgcgcgcgtgttcggcgtagaaggttttccgggggagaag
aaggtcgagaactcgatgtggacgctcgcggaatcactattgccgtcgaatgcgtcgaac
gcggaggtcagcgcctacacgcagggcttgatggatcttggcgcgacgttgtgcgtgcgc
ggcaaacccgattgcactcgctgtccgttcgcgcccgactgcgtcgccaacgtcaccgga
cgtcagcgcgaattgccgaccgctcgcccgaagaaagcggtgccgacgcgccgtacgtgg
atgctggtgctgcgcgacggcaacgcggtgatgctcgagcggcgtccgccgtcgggcatc
tggggcggtctgtggagtctgcccgaagcggccgacgaagcgacgctggccgagcgggcg
cgcgcgttcggcagcgatggcgaggtgtcagcgctggcgtcgttctcgcacgtgttcacg
catttcaagctcgatatcgaaccgcggcttgccgagctcgatcgcgatgtcggcgctctg
gccgcgctcaacgatgcggacaccgcctgggttgcgctcagcgatctcgattcgttcggc
gtgccggcgccggtgcgcaagctgctcgccagcctgcatggttcgttgatctag
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