Paraburkholderia atlantica CCGE1002: BC1002_0658
Help
Entry
BC1002_0658 CDS
T01217
Name
(GenBank) Three-deoxy-D-manno-octulosonic-acid transferase domain protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge00540
Lipopolysaccharide biosynthesis
bge01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BC1002_0658
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bge01005
]
BC1002_0658
Enzymes [BR:
bge01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
BC1002_0658
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
BC1002_0658
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
BC1002_0658
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
BC1002_0658
Lipopolysaccharide biosynthesis proteins [BR:
bge01005
]
Lipid A
BC1002_0658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_2
Glyco_trans_1_4
EryCIII-like_C
Motif
Other DBs
NCBI-ProteinID:
ADG14757
UniProt:
D5WCX8
LinkDB
All DBs
Position
1:731038..732351
Genome browser
AA seq
437 aa
AA seq
DB search
MLRAIYRALWWLIAPLAVLRLLIRSRKERGYREHIGERFGYSRGRLPEDGAPLIWVHAVS
VGETRAAQPLIDALMKARPDARILLTHMTPSGRATGTEIFGDRVLRSYLPYDVPHAVRRF
LRAWRPSLGLVMETEVWPTLIDECRRADVPLVLTNARMSARSFKRAAKFGGATKDVFGGF
ARVLAQSPSDAERLTSLGARNVAVLGNLKFDMSTPPELAARGHAWRAAIGTRPVWVAAST
REGEEALVLDAFAALGVDDALLILVPRHPQRFNEVAALVEKAGLRLERRSNWAPDAKIAS
AARTADDGVPPLPRDVNVLLGDSMGELGAYYAASDLAFIGGSLLPLGGQNLIEACAVGVP
VLIGPHVFNFTQATADAVAAGAAVQVQDPADLARALRELFGDKSRRLAMGGAAAAFAARH
RGATARTVDVLAALLPE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgctaagagcgatctatcgcgcgctctggtggctgatcgcgccgcttgccgtgctgcgt
ctgttgatccgttcgcgcaaggaacgcggttatcgcgagcatatcggcgagcgtttcggt
tattcgcgtggacgcttgcccgaagacggcgcgccgttgatctgggtgcatgcggtgtcg
gtcggcgagacgcgtgccgcgcagccgctgatcgatgcgctgatgaaggcgcgccccgac
gcgcgcattttgcttacgcacatgacgccgagcggccgcgcgaccggtacagagattttc
ggcgaccgcgtattgcgcagctacctaccgtacgacgtgccgcatgcggtacggcgcttc
ctgcgcgcgtggcggccgtcgctcggtctggtgatggaaacagaggtatggcccaccttg
atcgacgaatgccggcgcgccgacgtgccgctcgtgttgaccaacgcgcggatgtcggcg
cgttcgttcaagcgcgcggcaaagttcggcggcgcgacgaaggacgtgttcggcggcttc
gcgcgcgtgctcgcgcagagcccgtccgatgccgagcggctgacctcgctcggcgcgcgc
aacgtcgcggtgctcggcaatctgaagttcgacatgagcacgccgcccgaactcgcggcg
cgcggccacgcgtggcgcgcggcgatcggcacgcggcccgtgtgggtcgcggcgagcacg
cgcgagggcgaagaagcgctggtgctcgacgcgttcgcggcgctcggtgtcgacgatgcg
ctgctgattctggtgccgcgtcatccgcaacgcttcaatgaagtcgcggcgctcgtcgag
aaggcggggctgcggctcgaacgccgatcgaactgggcacccgatgcgaagatcgcgtcg
gcggcgcgcaccgccgacgatggcgtgccgccgctgcctcgcgacgtgaacgtgctgctc
ggcgattcgatgggcgagttgggcgcttactacgcggcgtcggatcttgcgtttatcggc
ggcagtctgttgccgctcggcggacagaacctgatcgaagcgtgcgcggtcggcgtgccg
gtgctgatcgggccgcacgttttcaacttcacgcaggccaccgccgatgcggtcgcggcc
ggcgccgccgtgcaggtgcaggacccggccgatctggcgcgcgcgctgcgtgagctgttc
ggcgacaagtcgcggcggctcgcgatgggtggcgctgctgccgcttttgcggcgaggcat
cgcggggcgacggcgaggacggtggatgtgttggcggcgttgttgccggagtga
DBGET
integrated database retrieval system
