Paraburkholderia atlantica CCGE1002: BC1002_0823
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Entry
BC1002_0823 CDS
T01217
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_0823
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BC1002_0823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
ADG14919
UniProt:
D5W577
LinkDB
All DBs
Position
1:complement(913742..914188)
Genome browser
AA seq
148 aa
AA seq
DB search
MVDIVDSATRSRMMSGIRGRNTKPEVLIRSLLHRQGLRFRLDARDLPGRPDIVLPRYRAV
VLVHGCFWHGHDCHLFKWPQTRPDFWRDKIGRNRSNDDKARAALLASGWRVAIVWECALR
GANRDIAGVIERLVAWIRSDAPEFEERG
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatatcgtcgatagcgcgacgcgcagccggatgatgtccggcattcgcggccgc
aacaccaagccggaggtgctgatccgcagcctgctgcatcggcaaggcctgcgtttcagg
ctcgacgcgcgcgatctacccggccgccccgacatcgtgctgccgcgttatcgcgcggtg
gtgctcgtgcatggctgcttctggcatggccacgactgtcatttgttcaaatggccgcag
acacggcccgacttctggcgcgacaagatcggccgcaatcgcagcaacgacgacaaggcg
cgcgccgcgctgctcgcgagcggctggcgcgtcgcgatcgtctgggaatgcgctttgcgg
ggtgcgaatcgcgatatcgcgggcgtgatcgaacggctcgtcgcgtggatcagaagcgac
gcgccggagttcgaggaacgcggctga
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integrated database retrieval system
