Paraburkholderia atlantica CCGE1002: BC1002_0887
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Entry
BC1002_0887 CDS
T01217
Name
(GenBank) O-antigen polymerase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge00540
Lipopolysaccharide biosynthesis
bge01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BC1002_0887
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bge01005
]
BC1002_0887
Enzymes [BR:
bge01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
BC1002_0887
Lipopolysaccharide biosynthesis proteins [BR:
bge01005
]
Core region
BC1002_0887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
DUF4229
DUF2637
Motif
Other DBs
NCBI-ProteinID:
ADG14983
UniProt:
D5W5E1
LinkDB
All DBs
Position
1:complement(990370..991671)
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AA seq
433 aa
AA seq
DB search
MIFASSLVWLTSALLFLAPAVNLMWRGGTGYCFFALVALALGAAIVNRRMPGYFSALRTY
RWYTIGMLAFVVGIGAQQLALGYWLPREFDSVARFVFALLVFLLLRQLPSRNLRMIGWGC
AAGALAVGAWAILNPPPGGWTDANRLNNSYTNAIPFGDTALLLAFLSVFTLGWDNPRDWR
VLVPRVLALVSGGYASFLSGTRGGWLAVPVFVVLLGMQYHWFTRKKRLLVATLVIVIGAG
GVLSTERVQKRFAEVPNDVSMMQKGEDFTATGLRLQLWNASRIIVERHPVWGVGKGHLVN
ELGAMAKRGEVKAEIVNERAHSDFFSTLAEMGAVGVICLLLFYYGMTVYFWRHRHASDPA
IRAASYSGLAVASSTVIFGLTIDVLVPVMVTVLLALLVATLLAMIDARKRELRSETRADP
TPAAVVRETQPRD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgcttccagtctggtctggctcacgtcggctctgctgtttctcgcgcccgcg
gtcaatctgatgtggcgcggcggcaccggctactgctttttcgcactcgtcgcgctcgcg
ctcggcgcagccatcgtcaaccggcgcatgccgggctatttctccgcgttgcgaacctat
cgctggtacacgatcggcatgctcgcgttcgtcgtcgggatcggcgcgcagcagctggcg
ctcggctactggctgccacgcgaattcgactcggtcgcccgcttcgtgttcgcgctgctg
gtgttcctgctgctgcgccaattgccgtcgcgcaatctgcgcatgatcggctggggctgc
gccgccggcgcgctcgcggtcggcgcatgggcgatcctgaatccgccgcccggcggctgg
accgacgcgaaccggctgaacaactcgtacacgaacgcgattccgttcggcgataccgcg
ctgctgctcgcgttcctgtccgtgttcacgctcggctgggacaatccgcgcgactggcgc
gtgctcgtgccgcgcgtgctcgcgctggtgtcgggcggctatgcgtcgtttctgtcgggc
acgcgcggcggctggctcgcggtgcctgtgttcgttgtgctgctcggtatgcagtaccac
tggttcacgcggaaaaagcgcctgctggtcgcgacgctcgtgatcgtgatcggcgcgggc
ggagtgttgtcgaccgaacgggttcagaagcgcttcgccgaagtgccgaacgatgtatcg
atgatgcaaaagggcgaagacttcacggccaccggtctgcgcctgcaactgtggaacgcg
tcgcggataatcgtcgagcggcatccggtgtggggcgtcggcaagggccatctggtcaac
gagctcggcgcgatggccaagcgcggcgaggtgaaggccgagatcgtcaacgaacgcgcg
catagcgacttcttctcgacgctcgccgagatgggcgcggtcggcgtgatctgtctgctg
ctgttctactacggcatgacggtgtatttctggcgacaccggcatgcgagcgacccggcg
attcgcgccgcgtcgtattcgggtctcgcggtcgcgtcgagcacggtgatcttcgggctc
acgatcgacgtgctggtgccggtcatggtgacggtactgctcgcgctgctggtcgcgacg
ctgctggcgatgatcgatgcacgcaagcgcgagttgcgaagcgaaacgcgggccgacccg
acgcccgccgcagtcgtgcgcgaaacgcagccgcgcgactga
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