Paraburkholderia atlantica CCGE1002: BC1002_1164
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Entry
BC1002_1164 CDS
T01217
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_1164
Transporters [BR:
bge02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1002_1164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
DUF2171
WTF
Motif
Other DBs
NCBI-ProteinID:
ADG15249
UniProt:
D5W6V4
LinkDB
All DBs
Position
1:1295151..1297955
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AA seq
934 aa
AA seq
DB search
MQSCPSRRESEAAPSGGGQQPAILTATHLSSNYIVRGTASGDARLRASASAPGWFAVLLC
AALILCLGVLPRIAQAAGPAVGGGTPVIPALQSLINSATVNATPASAASGTSAPEAASAP
SPASQAELARSLDSVIATLDNDRQRSALVAQLKKLRDVSQSAAQTVGPPAPAAVQPSPGL
LGAIASGIASFESDVHQGRTPVRYWSGRVTAAGNELYTIVSGQGREGVGTILLAMLGMLA
GWGACAGALIYLQHRVHRRFGIELVLRPNPTTRELLIFALRRVGPWIIAFIAALLFMRAM
PDALGRTLGMVVAYAIVAGAVFSAICLIMFSLFGSGHRRVAVRLLIDHARRVLFVIGVCG
ALGDAAVNYDVEHQIGTNLAALISTAANMTAAVLTGYFALAFRRPVAHLIRNRPYEQRND
HRAATDAFEVLAAMWHVPVLVLAAASVVATLGGSGSSENVLQISIVTALLLVLAFFLSAI
VLRMTRPRSARARRRSPYLTRLLRFCGTLLTLFIWLFFFELAARLWDVSLAAVIERNVAA
RGIAHAMTAIVATVFIAWLLWILVDTAITETLNPGSPRNKARIPSTRARTMLPLVRNVLL
VSIMTIGGIVTAANLGINVTPLLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGD
WIDVDGGHAGTVEHLSIRTVRLRDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMSFST
DVDEITQLIREVGAELMADFRYRREMLGPIEVWGLDRFDPNWMVVKGQIKTRPLQQWSVA
RAFNLRLKRKMDEAGIEIPVAQMRVYTSSKDSEGEPLRDDEMTGFVAPVDAGADDSRHAH
GDVHQRARDGVHGKAHRKAHESTRERTGEAAHEYPREAEYQVGAVGPSARASTHVPLAPA
RDVSHEPRPAPPPTGQTAPIPPQIPTAGDVGGKS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcatgcccgtcgcggcgtgagtccgaggctgcaccgtctggcggcgggcagcag
ccggcgattctcaccgccactcatctttcctccaattacatcgttcgcggcactgccagc
ggcgacgcccgcctgcgcgcgagcgcaagtgcgcccggttggtttgccgtgctgctatgc
gccgcgctgattctgtgtctcggcgtgctgccgcgcatcgcgcaagccgccggccccgcg
gtcggcggcggcacgccggtgattccggccttgcagagcctgatcaacagcgcgacggtg
aacgcgacgcccgcgtccgcggcgtcgggtacatcggcgcccgaggcggcgtcggcgccg
tcgcccgccagccaggcggagcttgcgcgctcgctcgacagcgtgatcgccacgctcgac
aacgaccgccagcgcagtgcgctcgtcgcccagctcaagaaattgcgcgacgtatcgcaa
agcgccgcgcaaaccgtcggcccgcccgcgcccgcggccgtgcaaccgagcccgggcctg
ctcggcgcgatcgcatcgggcatcgcgtcgttcgaatccgatgtgcatcagggccgcacg
ccggtgcgctactggagcgggcgcgtgaccgcggccggcaatgagctgtacacgatcgtc
tccggccagggccgcgagggtgtcggcacgatcctgctggcgatgctggggatgctggcc
ggctggggcgcctgtgccggcgcgctgatctacctgcagcatcgggtgcacagacgcttc
ggcatcgaactggtgctgcggcccaatcccaccacgcgcgagctgctgatcttcgcgttg
cgccgcgtcggcccgtggatcatcgcgttcatcgcggcgctgctgttcatgcgcgcgatg
cccgatgcgctcggccgcacgctcggcatggtggtcgcgtacgcgatcgtcgcgggcgcg
gtgttttccgcgatctgcctgatcatgttctcgctgttcggctcgggccaccggcgcgtc
gcggtgcgcctgctgatcgatcacgcgcgccgcgtgctgttcgtgatcggcgtgtgcggc
gcgctcggcgacgcagccgtcaattacgacgtcgagcatcagatcggcaccaacctcgcc
gcgctgatttcgaccgcggccaacatgacggccgccgtactgaccggctatttcgcgctc
gctttccgccggccggtcgcgcacctgattcgcaaccggccgtacgaacagcgcaacgac
catagggccgcaaccgatgcgttcgaggtgcttgccgcgatgtggcacgtgccggtgctg
gtgctggcggccgcgtcggtggtcgcgacgctgggcggctccggctccagcgaaaacgtg
ctgcagatctcgatcgttaccgcgctgctgctggtgctggcgtttttcctgtcggcgatc
gtgctgcgcatgacgcggccgcgcagcgcccgcgcgcggcgccgctcgccgtacctgacg
cggctgctgcgcttttgcggcaccttgctgaccttgttcatctggctgtttttcttcgaa
ttggcggcgcgtctatgggacgtgtcgctggccgcggtgatcgagaggaacgtggcggcg
cgcggcatcgcacatgcgatgacggcgatcgtcgccaccgtgttcatcgcgtggctgctg
tggattctggtcgacaccgcgatcaccgaaacgctcaatccgggcagcccgcgcaacaag
gcgcgcatcccgagcacgcgcgcccgcacgatgctgccgctggtgcgcaacgtgttgctg
gtttcgatcatgacgatcggcggcatcgtcaccgccgctaacctcggcatcaacgtgacg
ccgctgctcgccggcgcgggcgtgatcggtctggcgatcggtttcggcgcgcaatcgctg
gtgaccgacctgatcaccgggctcttcatcatcatcgaggacacgatctcggtcggcgac
tggatcgacgtcgatggcggccatgcgggcacggtcgaacatctgtcgatccgcaccgtg
cggctgcgcgacgggcagggcgcgatccacgcgattccgttctcgcagatcaagatcgtg
aagaacctgtcgcgcgatttcgcatatgcggtgttcgaggtgcgcatgtcgttctcgacc
gatgtcgacgagatcacgcagctgatccgcgaagtcggcgcggaactgatggccgacttc
cgctaccggcgcgagatgctcgggccgatcgaggtgtggggcctcgaccgtttcgatccg
aactggatggtggtcaaagggcagatcaagacgcggccgttgcagcaatggagcgtggcg
cgggcgttcaatttgcggctcaagcgcaagatggacgaggcgggcatcgagattccggtc
gcgcagatgcgggtgtacacgtcgtcgaaggatagcgagggcgagccgttgcgcgacgat
gagatgaccgggttcgtcgcgcctgtcgacgccggtgccgatgacagcaggcatgcacat
ggcgatgtgcatcagcgggcgcgcgacggcgtacacggcaaagcgcatcgaaaggcgcat
gaatccacgcgcgagcgcaccggcgaagcggcgcacgagtatccgcgcgaagcggagtat
caggtgggcgctgtcggcccgtcggcgcgcgcgtcgacacatgtgccgcttgcgcccgcg
cgtgatgtgtcgcacgaaccgcgtccggcgccgccgccgaccggacagaccgcgccgatt
ccgccgcagattccgacggcaggcgatgtgggtgggaagagttga
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