Paraburkholderia atlantica CCGE1002: BC1002_1191
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Entry
BC1002_1191 CDS
T01217
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bge03016
]
BC1002_1191
Enzymes [BR:
bge01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BC1002_1191
Transfer RNA biogenesis [BR:
bge03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BC1002_1191
Prokaryotic type
BC1002_1191
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADG15276
UniProt:
D5W6Y1
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All DBs
Position
1:1331099..1332034
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AA seq
311 aa
AA seq
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MTAPQRPRVPRRALDGVLLLDKPLGLSSNDALVRAKRLYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGIRTTTGDAEGEALDIRAVDCDEVAVRAALPRFIG
EIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRQVTIHSLELIACALPDVTFRVTCSKG
TYVRTLAEDIGEALGCGAHLVALRRTGVGALTLEHSVTLDALSDATELERDAWLQPVDAL
LSTFPQVCLSDDDTRRFLHGQRLKLSSLTIAADAVNAPRVRVYSAQGRLLGVAKPGEGVL
APERLVVTSET
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacctcaacgcccccgcgtgccgcgtcgcgcgctcgacggcgtgctgctgctc
gacaagccgctcggcctgtcgagcaacgacgcgctggttcgcgcgaaacgtctctatctg
gcgaaaaaggcgggccacaccggcacgctcgatccgctcgccaccggcttgctgccgctg
tgtttcggcgaggccaccaagttctcccaagacctgctcgaagccgataagacctacgag
gccacgatgcgtctcggcatccgcacgaccaccggcgacgccgagggcgaggcgctcgac
atccgcgccgtcgactgcgacgaagtggcggtgcgggcggcgttgcccagattcatcggt
gaaatcgttcaggtcccgccgatgtactcggcgctcaagcgcgacggcaagccgctgtac
gagtacgcgcgcgccggccaaacggtcgagcgggaagggcggcaggtgacgattcactcg
ctcgaactgattgcgtgcgcgctgccggatgtgacgtttcgcgtgacgtgcagcaagggc
acgtacgtgcgcacgcttgccgaggatatcggcgaggcgctgggctgtggcgcgcatctg
gtcgcgctgcgccgcacgggcgtcggcgcgctgaccctcgaacattcggtcacgctcgac
gcgttgtccgacgcgaccgaactcgaacgcgacgcatggctgcagccggtcgacgcgttg
ctgtcgacgttcccgcaggtctgtctgagcgacgacgacacgcgccgcttcctgcacggc
cagcgtctgaagctgtcgtccttgactatcgccgccgacgcggtaaatgccccgcgcgtg
agggtgtactcggcacaggggcgccttctcggggtcgcgaaacccggcgaaggcgtgctc
gcacccgaacgtctggtcgtgacatcggagacctag
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