Paraburkholderia atlantica CCGE1002: BC1002_1206
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Entry
BC1002_1206 CDS
T01217
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge02024
Quorum sensing
bge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BC1002_1206
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_1206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bge03019
]
BC1002_1206
03036 Chromosome and associated proteins [BR:
bge03036
]
BC1002_1206
Messenger RNA biogenesis [BR:
bge03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BC1002_1206
Chromosome and associated proteins [BR:
bge03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BC1002_1206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
SelB_WH1
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ADG15291
UniProt:
D5W796
LinkDB
All DBs
Position
1:complement(1350061..1350534)
Genome browser
AA seq
157 aa
AA seq
DB search
MASAESHPQNDFMNAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKRA
ISTIQLDTGTRPAPRTGRTSHGEHGARGPHGSREHREPREGRESYGASATERAPSERSGN
SEGPVVVTRRRRLFGTGGEGGNHGGNHGSGSPSGNQE
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcagaatcgcatccgcaaaacgacttcatgaacgccgcgcgcaaggaacga
aagcgcgtcgagatctatctggtcaacggcatccgcctgaccggatgcatcgagtcgttc
gatcagtacctggtgatgctgcgcacgccggttggcctgcaaggcatctacaagcgcgcg
atctccacgatccagctcgacaccggcacccgtccggcgccgcgcacgggccggacgtcg
catggcgaacatggcgcgcgcggtccgcatggttcgcgcgaacatcgcgagccgcgcgag
gggcgtgaatcgtatggcgcgtcggcgacggaacgcgcgccgagcgagcgcagcggcaat
tccgaaggtccggtggtcgtcacgcggcggcggcgtctattcggcactggcggcgaaggc
ggcaatcatggcggcaaccacggcagcggcagccccagcggcaatcaggaataa
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integrated database retrieval system
