Paraburkholderia atlantica CCGE1002: BC1002_1213
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Entry
BC1002_1213 CDS
T01217
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge00061
Fatty acid biosynthesis
bge00071
Fatty acid degradation
bge01100
Metabolic pathways
bge01212
Fatty acid metabolism
bge02024
Quorum sensing
bge04146
Peroxisome
Module
bge_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BC1002_1213
00071 Fatty acid degradation
BC1002_1213
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BC1002_1213
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_1213
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bge01004
]
BC1002_1213
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bge04147
]
BC1002_1213
Enzymes [BR:
bge01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BC1002_1213
Lipid biosynthesis proteins [BR:
bge01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BC1002_1213
Exosome [BR:
bge04147
]
Exosomal proteins
Exosomal proteins of breast milk
BC1002_1213
Exosomal proteins of breast cancer cells
BC1002_1213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Pept_S41_N
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADG15298
UniProt:
D5W7A3
LinkDB
All DBs
Position
1:complement(1355831..1357651)
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AA seq
606 aa
AA seq
DB search
MIEPTQAPQHVPDAGGTQVPNPVPNPVPNPVPNPAPNTDGIWYASYPDDVPRDIDVTQYE
SIDQFFDECTTQFRERVAYVSVGASLTYGELARKASAFAAYLQSIGVEPGERVAIMLPNT
FQYPVTLFGTIKAGAVVVNVNPLYTVRELAHQLKDSGAQTIVVFENFAKTLEDALPGTKV
RNVIVTGLGDLLADGVNLKGHLLNFMLRHVKKMVPAYKLPQAVPLLKALSIGYARPHTPV
RATHEDIAFLQYTGGTTGVAKGAMLTHRNIIANLLQAKAWAAGQLSGAGETVLTPLPLYH
IYSLTVNALIFMGLGGRNILIANPRDMKRVMMILRHEKFTSMTAVNTLYNAFLDNEEFCR
RDFSDLKLAMAGGMATQKSVAERFKAVTGKPIVEGYGLTECSPIVSMNPVDLTNLRDFEG
SIGLPAPSTQVRFRRDDGSWANIGEAGELCVKGPQVMKGYWNRPDETAKVIDGNGWLATG
DIGVMDSRGFIRLIDRKKDMILVSGFNVYPNEIEDVIAAHPDVREVAAIGVPDPAQGERV
KVFIVRRTPTLTAEQVIAYCRKNLTGYKVPKLVEFRDELPQTNVGKILRRALRDEELAKQ
GSARRE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagcccacccaagcgccgcagcacgtgccggatgcaggcggcactcaggtgcca
aacccggtgccaaacccggtgccaaacccggtgccaaaccccgccccgaacaccgacggc
atctggtacgcgtcctatccggacgacgtgccgcgcgatatcgatgtcacgcaatacgaa
tcgatcgaccagttcttcgacgaatgcaccacgcagttccgcgagcgcgtcgcgtacgtc
agcgtcggcgcgagcctgacgtacggcgagctggcccgcaaggcgagcgcgttcgcggcc
tacctgcaaagcatcggcgtggagcccggcgagcgcgtcgcgatcatgctgccgaacacg
ttccagtatccggtcacgctgttcggcacgatcaaggcgggcgccgtggtcgtcaacgtg
aatccgctctatacggtgcgcgaactcgcgcaccagctaaaggacagcggcgcgcagacg
atcgtcgtgttcgaaaacttcgcgaagacgctcgaagatgcgttgcccggcaccaaggtg
cgcaacgtgatcgtgaccggcctcggcgacctgctcgccgacggcgtgaatctgaagggc
cacctgctcaatttcatgctgcgtcacgtgaaaaagatggtgcccgcgtacaagctgccg
caggcggtgccgctgctgaaagcgctgtcgatcggttacgcgcggccgcacacgccggtg
cgcgcgacccacgaagacatcgcgttcctgcaatacacgggcggcaccaccggcgtcgcg
aaaggcgcgatgctcacgcaccggaacatcatcgccaatctgttgcaggcgaaggcgtgg
gctgcgggtcagctttccggcgcaggcgaaacggtgctcacgccgctgccgctttatcac
atctactcgctgaccgtgaacgcgctgattttcatggggctcggcgggcgcaacatcctg
atcgcgaatccccgcgacatgaagcgcgtgatgatgatcctgcgtcacgaaaaattcacc
agcatgaccgcggtcaacacgctctataacgcgttcctcgacaacgaggaattctgccgg
cgcgacttctcggacctgaagctcgcgatggcgggcggcatggcgacgcagaagtccgtc
gcggagcgcttcaaggcggtgacgggcaagccgatcgtcgagggctacgggctgaccgag
tgctcgccgatcgtatcgatgaatccggtcgatctgaccaatctgcgcgacttcgagggc
tcaatcggcttgcccgcgccgtccacccaggtgcgcttcaggagagacgacggcagctgg
gccaatatcggcgaggcgggcgagctgtgcgtgaagggcccgcaggtgatgaagggctat
tggaaccgccccgacgaaaccgcgaaggtgatcgacggcaacggctggctcgcaaccggc
gacatcggcgtaatggactcgcgcggctttatccgtctgatcgatcgcaagaaggacatg
atcctcgtgtcgggcttcaacgtgtatccgaacgaaatcgaggacgtgatcgccgctcat
ccggacgtacgcgaagtggccgcgatcggcgtgcccgatcccgcgcagggcgagcgcgtg
aaggtgttcatcgtgcggcgcacgccgacactgaccgccgagcaggtgatcgcgtactgc
cgcaagaatctgactggctacaaggtgccgaagctcgtcgagtttcgcgacgagctgccg
caaaccaatgtcggcaaaattctgcgccgtgcgttgcgcgacgaggaactcgcgaaacag
gggtctgcccgacgggaataa
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