Paraburkholderia atlantica CCGE1002: BC1002_1278
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Entry
BC1002_1278 CDS
T01217
Name
(GenBank) WD40 repeat, subgroup
Organism
bge
Paraburkholderia atlantica CCGE1002
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
ANAPC4_WD40
Ge1_WD40
NBCH_WD40
PD40
eIF2A
PQQ_2
TIR_2
TruB_C
Cytochrom_D1
PROPPIN
AAA_16
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADG15358
UniProt:
D5W7G3
LinkDB
All DBs
Position
1:1429104..1433441
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AA seq
1445 aa
AA seq
DB search
MSFPSAVNCEPAVRGAMPRIFISHASANNALALAIGHWLADNGWDDHFLDLEPVKGFAPG
ERWQQALKAAADRCEAVLFLISPAWCDSRSCLAQLSLARFLGKTIFGVLVEPTPPDALPK
EMTAQWQLCDLATGTQRRSFRVWHDPLVPQTEVSFAKAGLAKLELGLRRAGLAASSFSWP
PANDVERPPYPGLRALEAEDAAVFFGRDTAVVRGLDTLRSVREQGIERMLVILGASGAGK
SSFLRAGLWPRLKRDDRNFLPLPVIRPERAVLTGATGLVVSIEQAFQELAVPRTRAEIHQ
AVQTPDGFEQLLGQLQTLHCSRLGSDAIAPTVLICIDQGDELFGAEGEEESLHFLSVLAR
TLAAAESGGIQAIGKRQRALAVVAIRTDAYEQLRSAPMLRGISPRVFSLPPFERAEFKAV
IEGPAARATAAGRKLTIQPALTERLLQDTEGADALPLLAFTLERLLTDYGAAGNFSVADY
EAIGGVRGSIEAAVESAFADPGREPAVPADKAERERLLREGLIPWLARVERLTQQRKRRV
ARWDELPESAHAVLKRLIRYRLLLQGRRKAVAGDEEITIVEIAHEALLRQWPVLTTWLDA
DADALKAVETVQRAAHEWQKNGQGTAWLAHAGERLTSAEAVLQRSDFERLLGADGLSYLR
ACRGRDEDARAERELKLQQIAQARTASTQRRIQVLMGIFAVILIATAGWIIHQTRTVARQ
TSAVFASAATTANDAGNYDRAMRFAILAMGKSWLSPGSVDAELELMRGAQASMQIALLSG
HRDAVDSAVFSPDGKRVVTASWDGTARVWDAATGKQIVQLSGHQGLVYSAAFDPDGRRVV
TASADRTARVWDASTGKQIVQLGGHQDLVYFAAFNPDGRRVATASADRTARVWDAATGKQ
IVQLNGHQGPVFSAAFSPDGRRVVSASADRTARVWDAATGQAIAQLIGHRELVSSAAFSP
DGRRVVSASDDKTARVWDAANGQVITQLTGHQGPVFSAAFSPDGRRVVTASDDKTARVWD
AATGHVITQLTGHQGPVSSAAFTPDGLRVVTASDDKTARVWDAATGQMIAQLIGHEGPVN
VAVFSLDGQRVLTASRDGTARAWDAGQGILLLSGHQEPVVSAAFGPDGQRVVTASRDRTA
RVWDVATGRQIALLSGHRGWVYFAAFSPDGRRIVTTSADQTARVWNAAAGKQIAQLSGHQ
GTVLSAAFSPDSQRVVTASADGTARLWDATTGKLILILGGHQEPVDSVVYSPDGQRVVTA
SWDGTARVWDAATGKQILVLSGHHGTVFSAAFSPDGRRVVTAAADGTARVWDAATGKQIA
RFGGHQRAVSSAAFSPDGQRVVTASADQTARVWDAATGRVIAQLAGHRGPVSSAAFSPDG
QRVVTASADQTARVWPIRWLMQNRGRGLAMAVCKEKLVGANLLTTGDAAALALVRGREGE
NVCGS
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctttccgagtgcagtcaactgcgagccggcagttcgcggcgcgatgcccaggatc
ttcatcagccacgcgagcgcgaataacgctctcgcgctcgcgatcggacactggcttgcc
gataacggttgggatgaccacttcctggacctcgagccagtcaaggggtttgcgccaggg
gaacgctggcaacaagcgctcaaggctgcggccgaccgctgcgaggccgtgctgtttctg
atttcgcctgcgtggtgcgactctcgctcgtgcctggcccagttgagccttgccagattt
ctgggcaagacgatcttcggtgtactcgtcgagccgacgccgcccgacgccttgccgaaa
gagatgacggcgcaatggcagctctgtgatctcgccaccgggactcaacgccggagcttc
cgggtctggcatgacccgctcgtcccgcagactgaagtctcttttgccaaagcggggctt
gccaagctagagcttgggctgcgacgagcggggctcgctgcgtcgagcttttcgtggccg
ccggctaacgatgtcgagcggcccccttatccggggctgagagcgttggaggccgaggat
gcggccgtgttctttggccgggatacggcggtcgtgcgtggcctcgatacgttacgcagc
gtccgcgagcaggggatcgagcggatgttggtgatcctcggcgcatctggcgcgggcaag
tcgtcctttctgcgggccggcctgtggccgcgcctgaagcgcgatgaccgaaactttttg
ccgcttcctgtgattcggccagagcgcgctgttcttaccggcgccacgggactcgtcgtc
agtatcgagcaggcctttcaggaactcgctgtacccaggacgcgcgccgagatccaccag
gcagttcagactccggatggatttgagcaattgcttggccagcttcaaacgctgcactgc
tcgcggctcgggtcagatgccattgcgccgaccgttctgatctgcatcgatcagggcgat
gaattgttcggcgcagaaggcgaagaggagtctttgcacttcctgtccgtgcttgcccgg
acgctagccgcggcagaaagcggggggattcaggcgatcggcaaacggcagcgtgcgctt
gcagtcgtggcgatccgcaccgacgcttacgagcaattgcggagcgcgccaatgctgcgc
ggcatatcaccgcgtgtcttcagtctccctcctttcgagcgtgccgaattcaaggccgtg
attgagggtcctgccgcgcgggcgaccgccgccggacgtaagctgacgatccagccagcg
ctgaccgagcggcttcttcaggacactgaaggggcagacgcattgcccttgctggctttt
acgctcgagcggctacttaccgactatggcgccgccggaaacttcagcgtagccgactat
gaggcgatcggcggtgtgcgcggttccattgaggccgcagtcgaatcggcatttgccgat
cccggaagagagcccgctgttccagcagataaggctgagcgcgagcgtctactgcgcgag
ggcttgattccatggctcgcgcgcgtcgaacggctgacgcaacagcgcaagcgccgtgtg
gcacgctgggatgagcttcccgaatccgcccatgcggtcctgaagcgtctcatcaggtat
cgactgctattgcaaggccggcgcaaggccgtagctggcgatgaggaaatcaccatagtt
gaaatcgcgcacgaagcgttgttgcggcagtggcctgtccttaccacctggctcgacgcg
gacgcagatgcgctcaaggcagtcgaaaccgtgcagcgagcggcgcacgagtggcaaaag
aacgggcaggggacggcgtggctggcccacgccggcgagcggctgacgagtgcggaagca
gtccttcagcgttcggacttcgaaagactgctgggcgccgatggactttcgtatttgcgg
gcttgccgcgggcgcgacgaggacgcgcgcgcggagcgcgagttgaagttgcagcaaatc
gctcaggcacggacggcgtccacgcaacgacgcatccaggtattgatgggcatattcgcg
gtcattctgattgcgacagcggggtggatcattcatcagactcggacggtcgcacgccag
acttccgctgtgttcgcgtcggccgcgacgacggcgaacgacgcgggaaattacgatcgc
gcgatgcgcttcgcgatactggcgatggggaagagttggctctcgccgggatcggttgac
gcggagctggagctcatgcgcggcgcgcaagcgtcaatgcaaattgcgttgctcagcggg
catcgggatgcggttgattccgccgtcttcagccccgacggtaagcgggtggtgaccgcg
tcgtgggatgggaccgcgcgggtctgggacgcggcgacgggcaaacagatcgtgcagctc
agcgggcatcagggcctggtttattccgccgccttcgacccggacggccgccgggtggtg
accgcgtccgcggacaggaccgcgcgggtgtgggacgcgtctacgggcaaacagatcgtg
cagctcggcggacatcaggatctggtttatttcgccgccttcaacccggacggccggcgc
gtggcgaccgcgtccgcggacaggaccgcgcgcgtgtgggacgcagcgacgggcaaacag
attgtgcagctcaacgggcatcagggaccggttttctccgcggccttcagcccggacggc
cggcgcgtggtgagcgcgtccgcggacaggaccgcgcgggtgtgggatgcggcgaccggc
caggcgatcgcgcagctcatcgggcatcgggaactggtgagctcggccgccttcagcccg
gatggccggcgcgtggtgagcgcgtcagatgacaagaccgcgcgggtgtgggatgcggcg
aacgggcaggtcatcacgcagctcaccgggcatcagggaccggttttctccgcggccttc
agcccggacggccggcgggtagtgaccgcgtccgatgacaaaaccgcgcgggtgtgggat
gcggcgaccggccacgtgatcacgcagctcaccggacatcagggaccggtaagctccgcc
gccttcacgccggacggcctgcgtgtggtgaccgcttccgatgacaagaccgcgcgggtg
tgggatgcggcgaccggccagatgatcgcgcagctcatcggacacgaggggccggtgaac
gtcgccgtcttcagcctggacggtcagcgggtgttgactgcatcccgtgacgggaccgcg
cgcgcgtgggacgcggggcaggggatcttgctgctcagcgggcatcaggagccggtcgtt
tccgccgccttcggcccggacggtcagcgggtggtgactgcatcccgtgacaggaccgcg
cgcgtgtgggacgtcgccacgggccggcagattgcgctgctcagcgggcatcgcgggtgg
gtctacttcgcggccttcagcccggacggccgccggatcgtgaccacgtccgcggatcag
accgcgcgggtttggaatgcggccgcgggcaaacagatcgcccagctcagcgggcatcag
gggaccgttctttcggccgccttcagcccggacagccaacgggtggtaaccgcgtccgcg
gatgggaccgcgcggctgtgggacgccaccacgggcaaactgatcctgatcctcggcggg
catcaggagccggttgattccgtcgtctatagtccggacgggcagcgggtggtgactgcg
tcctgggatgggacagcgcgggtgtgggacgcggccacgggcaaacagatcctggtgctc
agcgggcatcatgggaccgttttttccgcggccttcagcccggacggacggcgcgtggtg
accgcggccgcggacgggaccgcgcgggtgtgggacgcggccacgggaaaacagatcgcc
aggttcggcgggcaccagcgagcggttagttctgccgccttcagcccggacggccagcgg
gtcgtgaccgcgtccgcggatcagaccgcgcgggtgtgggacgcggcgactggccgggtc
atcgcgcaactcgccgggcaccggggacccgtgagctcggccgccttcagcccggacggc
cagcgggtggtgaccgcgtccgcggatcagaccgcgcgggtgtggcctatccgatggctc
atgcagaatcgagggcggggtctggcgatggcggtgtgcaaggaaaagctcgtaggagca
aacttgctcacaaccggtgatgcagcggcccttgctctcgtacgcgggcgcgagggcgaa
aatgtatgcggatcctga
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