Paraburkholderia atlantica CCGE1002: BC1002_1408
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Entry
BC1002_1408 CDS
T01217
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bge03009
]
BC1002_1408
Enzymes [BR:
bge01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BC1002_1408
Ribosome biogenesis [BR:
bge03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BC1002_1408
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_ANTKMT
TRM5-TYW2_MTfase
Methyltransf_23
Methyltransf_15
Cons_hypoth95
RrnaAD
TRAM
Methyltrans_SAM
MTS
Methyltransf_11
Methyltr_RsmB-F
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ADG15484
LinkDB
All DBs
Position
1:1564861..1566291
Genome browser
AA seq
476 aa
AA seq
DB search
MSRTAPQRRSPRRSSKHARAHAPAPAPVITGNEPVIEIVSLDMEARGVGRTASEDGTPGK
VVFVEGALPGELVSYSTHRSKPKYEQAEVVQVFRESVIRTTPKCTYFNICGGCSMQHLDM
RAQVAVKQRVLEDNLQHLAKLRPETVFRPLHGPSWGYRYRARLAVRYLPEKGGMRIGFHE
KKSSYIADMKTCEVLPPHVSAMLMPLRFMVRKLSIYDRMPQLELAVGSSVTALVVRNLEP
LTAEDEQVLRKFADEHNVQFWIQPGGPDTVTPLYPLDVQLDYTLPEYGIRMPFKPTDFTQ
VNHAINRVLVSRALRLLAPARTDRVLDLFCGIGNFTLPLARISREVVGIEGSEVLTQRAL
ANAELNGVAGHTSFACRNLFEVTADDLRALGHFDKFLVDPPREGALAIAKALAEIAQSGN
GPLPKRIVYVSCAPATLARDAGLLVHEAGYRLVGAGVVNMFPHTSHVESIALFERD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccgaactgccccccaacgtcgctcgccgcggcgctcatcgaagcatgccagggcg
cacgccccagcgccggcgcccgtcattaccggcaacgaaccggtcatcgaaatcgtttcg
ctcgatatggaagcgcgcggcgtgggccgcaccgcgagcgaagacggcacgccaggcaag
gtcgtgttcgtcgaaggcgcactgccgggtgaactcgtcagttattcgacgcatcgcagc
aagccgaaatacgagcaggccgaagtcgtgcaggtgttccgcgaaagcgtgatccgcacg
acgccgaaatgcacgtacttcaacatctgcggcggctgctcgatgcagcatctcgacatg
cgcgcgcaggtggcggtcaagcagcgtgtgctcgaggacaacctgcagcatctggcgaag
ctgcgccccgaaacggtgttccggccgcttcacgggccgtcctggggttatcgctatcgc
gcgcggctcgcggtgcgctatctgccggagaagggcggcatgcgcatcggctttcacgag
aagaagagcagctatatcgccgacatgaagacctgcgaggtgctgccgccgcatgtgtcg
gcgatgctgatgccgctgcgcttcatggtccgcaagctgtcgatctacgaccgtatgccg
cagctcgagctcgcggtcggctcgtcggtcacggcgctcgtcgtgcgcaacctcgaaccg
ctgacggcggaggacgagcaggtgctgcgcaagttcgcggacgagcacaacgtgcagttc
tggatccagcctggcggtcccgacacggtcacgccgctttatccgctcgacgtgcagctc
gactacacgctgccggaatacggcatccgcatgcctttcaaacccactgatttcacccag
gtcaatcacgcgatcaatcgtgtgctggtgagccgcgcgttgcggctgctggcgccggca
cgcaccgaccgcgtgctcgacctgttctgcgggatcggcaatttcacgctgccgctcgcg
cgcatctcgcgggaagtggtcggcatcgaaggcagcgaagtgctgacccagcgcgcgctc
gcgaacgcggaactgaatggcgtcgccggccatacgtcgttcgcgtgccgcaacctgttc
gaagtgaccgccgacgacctgcgcgcgctcggccacttcgacaagttcctggtcgacccg
ccgcgcgaaggcgcgctcgcgatcgcgaaggcgctcgcggagatcgcgcaaagcggcaac
gggccgctgccgaagcgcatcgtctacgtgtcgtgcgcgccggccacgctcgcgcgcgat
gccgggctgctcgtgcatgaggccggctatcggctggtgggcgcgggcgtcgtcaatatg
ttcccgcatacgtcgcacgtggaatcgattgcgctgttcgagcgcgattga
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