Paraburkholderia atlantica CCGE1002: BC1002_2037
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Entry
BC1002_2037 CDS
T01217
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03420
Nucleotide excision repair
bge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BC1002_2037
03430 Mismatch repair
BC1002_2037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_2037
Enzymes [BR:
bge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BC1002_2037
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BC1002_2037
MMR (mismatch excision repair)
Other MMR factors
BC1002_2037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ADG16096
UniProt:
D5W9P1
LinkDB
All DBs
Position
1:complement(2282739..2285126)
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AA seq
795 aa
AA seq
DB search
MSPELRSAKKMPDLLSNLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGLA
SPATVLAVTFTNKAAREMMARLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQ
ILDTADQLSAIKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVEL
YEAYDQQCQREGVVDFPELLLRCYELLAHNPPLRAHYQARFRHILVDEFQDTNKLQYAWL
KLLAGQHNAIFAVGDDDQSIYAFRGANVGNMRDFEHEFNVRNLIKLEQNYRSHGHILDAA
NQLIANNSRRLGKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIRALINTGLSRSEIAVL
YRSNAQSRTIEHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFGRVVNF
PTRGIGARSIEQLADAARLYNCSMAAAIPYVAGKAGSSLAAFANLIGKMRADTQQMSLPE
TVEYVVRASGLADFYQNEREGQERLENLQELVNAAAAFVSEEGYGLDTPARSIPLRPGAS
AAPELAVATDDPNTVVLDAPSIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQL
MTVHAAKGLEFTAVFITGLEEGLFPHENSAMEADGLEEERRLMYVAITRAKERLYLSFAQ
SRMLHGQTRYNIRSRFFDELPQETLKWLTPKVEAGSRWGGRSDNAGYGRDWFARPGYGGG
SAAAVTSAPAPAFANEQRAAETGFRVGQQVFHTKFGEGTITALEGNGTDAKAQVRFKRHG
EKWLALAVAKLQAVE
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgaactgcgctccgcgaaaaaaatgcctgacctcctctccaatctaaacccc
gaacaacacgccgccgtaacgctcccgaatgagcccgccctgatcctggcgggcgccggc
agcggcaaaacccgcgtcctgatcacccgcatcgcgtggctgatccagcaaggcctcgcg
tcccccgcgaccgtcctcgcggtgaccttcaccaacaaagccgcccgcgaaatgatggcg
cgtctctcggcgctattgccgatcgacacgcgcggcatgtggatcggcacgttccacggc
ctgtgcaaccggatgctgcgcgcgcatcaccgcgacgccgggctgcccgccacgttccag
atcctcgataccgcggaccagctgtcggcgatcaagcgcctgatgaagggcctcaacatc
gacgacgaaaagtacccggcgaaaaatctccagtacttcatcaacaacgcgaaagagcag
ggcctgcgccccaaagacgtcgacgctaccgacaacttcaaccgcaagttcgtcgagctc
tacgaagcctacgatcagcaatgccagcgcgaaggcgtcgtcgactttcccgaactgctg
ctgcgctgctacgagctgctcgcgcacaatccgccgctgcgcgcgcattaccaggcgcgc
ttcaggcacatcctcgtcgacgagtttcaggacaccaacaagctgcaatacgcatggctc
aagctgctcgcgggtcagcacaacgcaatcttcgcggtcggtgacgacgaccagtcgatc
tatgcgttccgcggcgcgaacgtcggcaacatgcgcgacttcgagcacgagttcaacgtg
cgcaatctgatcaagctcgagcagaactatcgctcgcacggccatattctcgatgccgcg
aaccagctgatcgcgaacaattcgcggcgcttgggtaagaatctgcgcactgacgcgggc
cacggcgaaccggtgcgcgtctacgaatcggcgaccgattcgcaggaggccggctggatc
gtcgaagagatccgcgcgctgatcaacaccggcctgtcgcgcagcgaaatcgccgtgctc
taccgcagcaacgcgcagtcgcgcacgatcgagcacacgctcgtcaacgcgggcatcgcc
taccgagtgtatggcggcctgcgctttttcgagcgtcaggaagtcaagcacgcgctcgcc
tatctgcggctgatcgacaacccgaacgacgacaccgcgttcggccgcgtcgtcaatttc
ccgacccgtggcatcggcgcgcgttcgatcgaacaactcgccgacgcggcgcgtctgtac
aactgctcgatggccgcggcgattccatacgtcgccggcaaggcgggctcgagcctcgcc
gcgttcgcgaacctgatcggcaagatgcgcgccgacacgcagcagatgagcctgccggag
accgtcgagtacgtggtccgcgcgagcgggctcgccgacttctatcagaacgagcgcgaa
ggccaggagcggctggagaacttgcaggaactcgtcaacgcggccgccgcgttcgtcagc
gaggaaggctacgggctcgatacgcccgcgcgctcgatcccgctgcgcccgggagcgagc
gcggcgcccgaactcgcggtcgcgaccgacgatccgaacacggtggtcctcgatgccccg
agcatcgccgatcccgcgcaaaaccccgacacgatgacgccgctcgccggcttcctgtcg
cacgcatcgctcgaagcgggcgacaaccaggcgcaggccgggcaggaagcggtgcagttg
atgaccgtgcacgcggcaaaggggctcgaattcaccgcggtgttcatcaccggtctcgaa
gaggggctgttcccgcacgagaacagcgcgatggaggcggacggcctcgaagaagagcga
cgcctgatgtatgtcgcgatcacgcgcgcgaaggagcggttgtatctgtcgttcgcgcag
agccggatgctgcacggccagacccgctacaacatccgctcgcgtttcttcgacgaattg
ccgcaggaaacgctgaagtggctcacgccgaaggtcgaggcgggctcgcgctggggcggc
cgctcggacaacgccggttacgggcgcgactggtttgcgcggccgggctatggcggcggt
tcggcggcggcggtgacctccgcaccggcgcccgccttcgcgaacgagcagcgcgcggcc
gaaacgggctttcgcgtcggccagcaggtgttccacacgaagttcggcgaaggcacgatt
accgcactcgaaggcaacggcaccgacgcgaaagcgcaggtccgcttcaagcgacacggc
gaaaagtggctggcgctggcggtagccaaattgcaggcggtcgaatga
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