Paraburkholderia atlantica CCGE1002: BC1002_2170
Help
Entry
BC1002_2170 CDS
T01217
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03420
Nucleotide excision repair
bge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BC1002_2170
03430 Mismatch repair
BC1002_2170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_2170
Enzymes [BR:
bge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BC1002_2170
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BC1002_2170
MMR (mismatch excision repair)
Other MMR factors
BC1002_2170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADG16229
UniProt:
D5WAE9
LinkDB
All DBs
Position
1:complement(2431475..2433670)
Genome browser
AA seq
731 aa
AA seq
DB search
MDIQYASHPENPSNPQNRSVSTVAESAPSFDTAAWLAKLNDAQREAVEYGTDTPDALPGA
LLVIAGAGSGKTNTLAHRVANLVVKGADPQRILLLTFSRRAALEMTRRVTRITGAAATSV
GARAALAQGLTWAGTFHSVGARLLREYADLIGLAPAFTINDREDSADLMNLVRHELGLSA
KERRFPAKGTCFAIYSRVVNTGASLGQVLDSAFPWCREWEDDLRRLFAAYVDAKQKQSVL
DYDDLLLYWSHMAAEPSIAADLSARFDHVLVDEYQDTNRLQASILLALKPDGRGLTVVGD
DAQSIYSFRGATVRNILDFPTQFEPPAKQVTLERNYRSTEPILAASNAVIELASERYTKN
LWTDKASAQRPRLVTVADDAAQARYVVEQVLEAREQGVKLKSQAVLFRAAHHSAALEIEL
TRRNIPFVKFGGLKFLDSVHVKDVLAVLRWAENPRDRVAGFRVVQLLPGVGPATAAKVLD
DIVARADGGDPVATAGGVLAAFAAPARAQEDWHPFVKLMSSVYGRQTPWPAEFEMVRRWY
EPHLERNHEDAAIRHADLLQMESIAGTYPSRERFLTELTLDPPDATSDESGVPLIDEDYL
ILSTIHSAKGQEWRNVFVLNGVDGCIPSDLGTGSDEEIDEERRLLYVAMTRAKEDLHIVV
PQRFYVHNQTHLGDRHVWASRTRFIATPMLPLFDAYAWPRVPVASAPSAAGLAAAAQAKI
EIAAKLRKMWD
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatatacagtatgcgtcgcatcctgaaaatccatccaacccgcaaaaccgctcagtg
tccaccgtcgccgaatccgctccgtcgttcgataccgccgcctggctcgccaagctcaac
gacgcccaacgcgaagccgtcgaatacgggaccgacacgccagatgcgctgccgggcgcg
ctgctcgtgatcgcgggcgccggctccggcaagaccaacacgctcgcgcaccgcgtcgcc
aatctggtggtgaagggcgccgatcctcagcgcatcctgctgttgaccttctcgcgccgc
gcggcgctcgaaatgacccgccgcgtgacacgtatcaccggcgccgcggccaccagcgtc
ggcgcacgcgccgcgctcgcgcaagggctgacgtgggcgggcacgtttcacagcgtcggc
gcacggctgttgcgcgaatacgcggatctgatcggcctcgcgcccgcgttcacgatcaac
gaccgcgaagactccgccgacctgatgaacctcgtgcgccacgagctcggactgtccgcg
aaggagcggcgctttccggcgaagggcacctgcttcgcgatctactcgcgcgtcgtcaac
acgggtgcatctctcggtcaggtactggacagcgcgtttccgtggtgtcgcgagtgggag
gatgacctgcgccggctgttcgccgcgtacgtcgacgccaagcagaagcagagcgtgctc
gactacgacgatctgctgctctactggtcgcacatggccgccgagcccagcatcgcggcg
gatttgtcggcacgcttcgaccatgtgctggtcgacgaataccaggacaccaaccgcctg
caggcgtcgatcctgctcgcgctgaagccggacggccgcggcctgaccgtggtcggcgac
gacgcgcagtcgatctattcgtttcgcggcgcgaccgtgcgcaatatcctcgatttcccc
acgcaattcgagccgccagcgaagcaggtcacgctcgaacgcaactatcgctcgaccgag
ccgattctcgccgcgtcgaacgcggtgatcgaactcgcgagcgagcgatacacgaagaat
ttgtggaccgacaaggcgtcggcgcagcgcccgagactcgtcacggtcgccgacgatgcc
gcgcaagctcgctacgtcgtcgagcaggtgctcgaagcgcgcgagcagggcgtgaagctg
aagtcgcaggcggtgctgtttcgcgcggcgcatcacagcgccgcgctcgagatcgaactc
acgcgccgcaacatcccgttcgtaaaattcggcgggctcaaatttctcgactcggtgcac
gtgaaggacgtgctcgcggtgctgcgctgggccgagaatccgcgcgaccgtgtcgccggc
tttcgcgtcgtgcagttgctgccgggcgtcggtccggccactgcggcgaaggtgctcgac
gacatcgttgcgcgcgccgacggcggcgatccggtcgcgaccgcgggcggtgtgctggcc
gcgtttgccgcgcccgcgcgcgcgcaggaagactggcatccgttcgtcaagctgatgtcg
agcgtgtatggccgacaaacgccgtggcccgccgagttcgagatggtgcggcgctggtac
gagccacatctggagcgcaatcacgaggacgccgcgatccgtcacgcggacctgctgcag
atggaaagcatcgctgggacgtatccgtcgcgtgagcgcttcctgaccgagctgacgctc
gacccgcccgacgccaccagcgacgaatccggcgtgccgctgatcgacgaggactacctg
atcctgtcgacgatccattcggcgaagggccaggagtggcgcaacgtgttcgtgctgaac
ggcgtcgacggctgcattccgtccgatctcggcaccggcagcgacgaggaaatcgacgag
gagcggcgcctgctttacgtggcgatgacgcgcgcgaaggaagacctgcatatcgtcgtg
ccgcagcgcttttacgtgcacaaccagacgcatctgggcgaccgccatgtgtgggcgtcg
cgcacccgcttcatcgccacgccgatgctgccgctgttcgacgcctacgcatggccgcgc
gtaccggtggcgagcgcgccgagcgcggcggggctcgccgccgccgcgcaggcgaagata
gagatcgcggcgaagctgaggaagatgtgggattga
DBGET
integrated database retrieval system
