Paraburkholderia atlantica CCGE1002: BC1002_2676
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Entry
BC1002_2676 CDS
T01217
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bge03016
]
BC1002_2676
Enzymes [BR:
bge01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BC1002_2676
Transfer RNA biogenesis [BR:
bge03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BC1002_2676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ADG16724
UniProt:
D5WD98
LinkDB
All DBs
Position
1:complement(2976189..2978327)
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AA seq
712 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPTAAELMQQADAL
AQEIDLDFLWECAPDDEFPFATLGAEYFGASFGAIERAALVLRMHGSPVYFRRKGRGMYQ
RAPQEQLKMALAGLERKRQQALVQAQYEEELKAGRLPEAFAGGKGLALLTKPDKNTIEYK
ALEGAAAARGISQARLMLECGAIASPRALHEAKFLSEYFPHGTGFPSVAAANVPDDLPQA
DVEAFSIDDITTTEIDDAFSVEHLADGRVRIGVHIAAPALGIQRGDDVDAIARARLSTVY
MPGDKITMLPDSVVDTFTLAEGGYRPALSLYVIVNRETQEIVASETRAERVFVKNNLRHN
TLDEVVTEEALAEGTGEYPHKDDIAVLWPFAQALFEKRQTARAGYGLRREVQRNTDFNFY
VDGEHITITPRRRGSPLDTIVAELAILANSSWGAFLHDHGVPGIYRTQRAFGAPSGPKRT
RMQTNAAPHEGLGVSQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLF
AVVQGFDDTYTAYADYQRRMEYFWCLRWLTQENRKQVVASVVKGDLVRLEEIPLLLHVPG
LGVHARGTRLQLEVMSIDELTIEASVRLLHVLDAPTVTSGAEAEEGEDEGDEELLDAADD
SAESEAEAEAEADGGNPNDNPGAGESAAGGNGNDNDAANTADNDQHITEPGR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggccggcagcgtattgtcgcgtcag
ggtgacgcgtttcaggtcgagttgccgggcgggcggcgcgcgaaggtgcgcgccaaggat
gtgctgatcgagttcgagaagcccaccgcggccgaactgatgcagcaggccgacgcgttg
gcgcaggaaatcgatctggacttcctgtgggaatgcgcaccggacgatgaattcccgttc
gcgacgctgggcgccgagtacttcggcgcgagcttcggcgcgatcgagcgcgcggcgctg
gtgctgcgcatgcacggttcgccggtgtacttccggcgcaagggccgcggcatgtaccag
cgcgcgccgcaagagcagctgaagatggcgctcgcgggcctcgagcgcaagcgccagcag
gcgctcgtgcaggcgcagtacgaggaagaactgaaggcaggccgtctgccggaagcgttc
gcgggcggcaagggcctcgcgctcctgacgaagcccgacaagaacacgatcgagtacaag
gcgctcgaaggtgccgcggccgcgcgcggcatctcgcaggcgcggctgatgctcgaatgc
ggcgcgatcgcgtcgccgcgcgcgctgcacgaagcgaaattcctgtccgagtactttccg
cacggcaccggcttcccgtccgtcgcggccgcgaacgtaccggacgatctcccgcaggcc
gacgtcgaagcgttctcgatcgacgacatcaccaccaccgaaatcgacgacgcgttctcg
gtcgagcatctggccgacggccgcgtgcggatcggcgtgcacatcgccgcgccggcgctc
ggcatccagcgcggcgacgacgtcgatgcaatcgcgcgtgcgcgtttgtcgacggtctac
atgcccggcgacaagatcacgatgctgcccgacagcgtcgtcgacaccttcacgctcgcc
gagggcgggtatcggccggcgctgtcgctgtatgtgatcgtcaatcgcgagacgcaggag
atcgtcgcgagcgaaacgcgcgcagagcgcgtgttcgtgaagaacaatctgcgccacaac
acgctcgacgaagtcgtcaccgaggaggcgctcgccgagggcaccggcgagtatccgcac
aaggacgatatcgccgtgctgtggccattcgcgcaggctctgttcgaaaagcgccagacc
gcgcgcgccggctacggcctgcgccgtgaagtgcagcgcaataccgacttcaatttctac
gtcgacggcgagcacatcacgatcacgccacgccggcgcggttcgccgctcgacacgatc
gtcgccgaactggcgattctcgcgaactcgtcgtggggcgcgttcctgcacgatcacggc
gtgccgggcatctatcgcacgcagcgcgcgttcggcgcgccgagcggcccgaagcgcacg
cgcatgcagaccaacgccgcaccgcacgaagggctcggcgtgtcgcaatacgcgtggagc
acgtcgccgctgcgccgctacgtcgacctcgtgaaccagtggcagctgatcgcatgcgtg
cagcatggcgtgaccgccaagctcgccgcgccgttcaagccgaaggacgccgatctgttc
gcggtcgtgcagggcttcgacgacacctacaccgcatatgccgactaccagcgccgcatg
gagtacttctggtgtctgcgctggctcacgcaggaaaaccgcaagcaggtcgtcgcgtcg
gtcgtgaagggcgatctcgtgcggctcgaggaaattccgctgctgctgcacgtgccgggt
ctcggcgtgcatgcgcgcggcacgcgcttgcaactggaagtgatgtcgatcgatgaactg
acgatcgaagcgtcggtgcgtttgttgcacgtgctcgatgcgccgaccgtgacgagcggc
gccgaagccgaagaaggcgaggacgagggcgacgaagaattgctcgacgccgcggacgac
agcgccgaaagcgaagcggaggcggaggccgaagccgacggcggcaatccgaacgacaac
cccggcgccggcgaatccgcggcaggcggcaacggcaacgacaacgacgccgcgaacacc
gccgacaacgaccaacacatcacggagccgggacgatga
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