Paraburkholderia atlantica CCGE1002: BC1002_2708
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Entry
BC1002_2708 CDS
T01217
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bge02044
]
BC1002_2708
02035 Bacterial motility proteins [BR:
bge02035
]
BC1002_2708
Secretion system [BR:
bge02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
BC1002_2708
Bacterial motility proteins [BR:
bge02035
]
Pilus system
Pilus assembly proteins
BC1002_2708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_30
AAA_11
AAA_22
AAA_16
AAA_19
AAA_23
Mg_chelatase
DEAD
DUF5073
Cytochrom_C
nSTAND3
AAA_29
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADG16756
UniProt:
D5WDD0
LinkDB
All DBs
Position
1:3010213..3011469
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AA seq
418 aa
AA seq
DB search
MQTPFATAAALPRPLAADGESSATNLNDQDNAPAVRLLTDTLHEATRRNASDIHIEPAEH
GWRVRLRIDGVLHEIPRPPAHLRDAFVTRVKVLARMDIAERRVPQDGRLRLATSPGRLED
YRVNSLPTLFGEKLVLRRLDALPADLSLDSLGLDPRQREAVDAAIRAPHGLMLVTGPTGS
GKTLSLYCFLNLLNGEARNLCSVEDPAEIQLAGINQVSVREKAGLTFAVALRAFLRQDPD
VIMVGEIRDNETADVAVKAAQTGHLVLSTLHTNDAPAAIARLIDIGVEPYNLAAALRMVT
AQRLVRRLCVACRAPAPHSATALHAAGFGEHELDGWQPYAATGCAACHGIGYRGRVGIHQ
VMPVSDAMRELIVASAGAHELARLAQTEQVATLRDAALARVRDGTTSLAEALAATEVA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacccttcgccaccgccgcggcgttgccgcgcccactcgctgccgacggcgaa
tccagcgcaacgaacctgaacgatcaggacaacgccccggccgtgcgtctgttgaccgac
acgttgcacgaagcgacgcggcgcaatgcgtcggatatccacatcgagccggccgagcat
ggctggcgtgtacggctgcgcatcgacggcgtactgcatgaaatcccgcggccgcccgcg
catctacgcgacgcgttcgtcacccgtgtgaaggtgctcgcgcgcatggacatcgccgag
cgtcgcgtgccgcaggacggccggctacgccttgcgacgtcgcccgggcggctcgaggat
taccgcgtcaattcgctaccgacgctgttcggcgaaaagctcgtgctacgacggctcgac
gcgctgcccgccgatctttcgctcgattcgctcggcctcgatccgcggcagcgcgaagcc
gtggacgccgcgatccgcgcgccgcacggtctgatgctcgtcaccggaccaacgggcagt
ggcaagacgctgtcgctgtactgcttcctgaatctgctgaacggcgaggcgcgcaacctc
tgctcggtggaagacccggccgagatccaactggccggcatcaaccaggtcagcgtgcgc
gaaaaagccgggctgacgttcgcggtcgcactgcgcgcgttcctgcgtcaggacccggac
gtgatcatggtcggcgaaatccgcgacaacgaaaccgccgacgtcgccgtgaaggccgcc
caaaccggccacctcgtgctgtccacgctgcatacgaacgacgcgcccgcggccatcgcg
cggctcatcgatatcggtgtcgagccatacaaccttgccgccgcgctgcggatggtgacc
gcgcagcggctggtgcggcgactgtgcgtcgcgtgccgcgcacccgcgccgcattcggcg
acggcgcttcacgccgcgggcttcggcgaacatgagctcgacggctggcaaccgtatgcg
gcgaccggatgcgcggcttgccatggcatcggctatcgggggcgcgtcggcatccatcag
gtgatgcccgtttccgacgcaatgcgcgagctgatcgtcgcaagcgcgggcgcgcacgaa
ctggcccgcctcgcgcagaccgaacaggtcgcgacactacgcgacgcggcgttagcgcgc
gtgcgcgacggcaccaccagtctcgccgaagcgctcgccgccacggaggtcgcatga
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