Paraburkholderia atlantica CCGE1002: BC1002_2871
Help
Entry
BC1002_2871 CDS
T01217
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BC1002_2871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bge03021
]
BC1002_2871
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_2871
Enzymes [BR:
bge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BC1002_2871
Transcription machinery [BR:
bge03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BC1002_2871
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BC1002_2871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADG16919
UniProt:
D5W5M8
LinkDB
All DBs
Position
1:complement(3185286..3186263)
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGESHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGEESSKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEAAAETP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagatcattgcagttgaatcgcttggcgagagccac
gcgaaagtggtcatggagccgtttgaacgcggttatggccacaccttgggtaacgcgctt
cggcgcgtgctgttgtcgtcgatggtcggttatgccccgaccgaggtgacgattgcaggc
gtcgtgcatgagtattcgacgctcgacggtgtgcaagaggatgtggtcaacctgttgttg
aacctgaagggcgtcgtcttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgtggtaaccgccggtgatatcgaactcgcacacgattgcgaagtc
atcaatccggaccacgtgattgcgcatctgtcgaagggtggcaagctcgacgtgcagatc
aaggtggaaaagggccgcggctatgtgccgggcaatgtgcgtcgttacggtgaagagtcg
tcgaagattatcggccgaatcgtgctggacgcgtcgttttcgccggttcgtcgcgtgagc
tacgcggtggaaagcgctcgtgtcgagcagcgcaccgacctcgacaaactcgtgatgaac
atcgaaaccaacggtgtgatttcgccggaagaagcgatccgccaatcggcgcgcattctg
gtcgatcagctctcggtgttcgcggcgctggaaggtaccgaagcagcggcagaaacgccg
tcgcgcgcaccgcagatcgatccgatcctgctgcgcccggtcgacgatctcgaactgacg
gttcgttccgcgaactgcctgaaggccgagaacatctactacatcggcgacctgatccag
cgtaccgagaacgagctgctcaagactccgaatctgggtcgcaagtcgctgaacgagatc
aaggaagttctggcatcgcgcggtctgacgctcggcatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
DBGET
integrated database retrieval system
