Paraburkholderia atlantica CCGE1002: BC1002_2957
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Entry
BC1002_2957 CDS
T01217
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bge01011
]
BC1002_2957
Enzymes [BR:
bge01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BC1002_2957
Peptidoglycan biosynthesis and degradation proteins [BR:
bge01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BC1002_2957
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ADG17004
UniProt:
D5W5W3
LinkDB
All DBs
Position
1:complement(3270638..3272644)
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AA seq
668 aa
AA seq
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MLCLGPIRAPETTMSKRLFRVYRAAGIALAAAALVACTTASAVKPLPISQLTNDDQIFVQ
LREAARTNDAARAAQLASMIPNYPAPSYLEYFQIKPQLFDSTGHARIDAPDAPVLAFLQK
YDGQAIADRMRNDYLTVLGTRHDWRNFDQQYAKFVLDDDTQVKCYALESRASRGENVADA
ARTLLVDPKWYGDGCVDLITVLGVNRQFSADDIWAQIRLAYEQNYTNTGSKLVDALGDQP
PDPVLFSQAANTPPLLLARGVGPDAQSHQLALLAITRMARNDPAMAAATFASVAPSLNSP
ERAIGWGTIGYQGALKQMPGAVDWFRLSANAPLSNPAYEWRTRSALLAGDWNMARWSIEQ
MPESLRKQPSWVYWHARALKQAGDTATANQEFQSIASNFNFYGQLALEELGQKITVPPKT
TVTDAEVQQAGTTPGFDLAQRFYELNLRLEGNREWNWPLRGMTDRQLLAAAEYARRIELY
DRTVNTADRTKSEHDFSLRYLSPFRNIVEQDAQSSGLDVEWAYGLIRQESRFIINARSDV
GAGGLMQLMPATAQLVAKKIGLGPLSREQMNDINTNILLGTNYLAMIYNQFDGSAVLATA
GYNAGPGRPRNWRQSLQRPVEGAVFAEAIPFQETRDYVKNVLSNTVYYAALFEGRPQSLK
ARLGYIAP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgctatgcttgggtccaattcgcgctccagaaacaacgatgtcaaaacgcctttttcga
gtatatcgcgcggccggtatcgcgctggctgcagcggcactcgtggcctgcaccactgcc
tcggccgtcaagcctcttccgatctcccaacttacgaacgacgaccagattttcgtccag
cttcgcgaagccgcgcgcactaacgacgcagcgcgtgcagcccagctagcgagcatgatc
ccgaattatccggcgccctcgtatctggagtacttccagatcaagccgcagttgttcgat
tcgaccggccatgcgcgcatcgacgcgccggacgcgccggtgctcgcgttcctgcagaag
tacgacggtcaggcgatcgccgatcgcatgcgcaacgactacctgaccgtgctcggcacg
cgccatgactggcgcaacttcgaccagcagtacgcgaagttcgtgctcgacgacgacact
caggtcaagtgctacgcgctcgaatcgcgcgcgtcgcgcggtgagaacgtcgcggacgcg
gcgcgcacgctgctcgtcgatccgaagtggtacggcgacggctgcgtcgatctgatcacg
gtgctcggcgtgaaccgccagttcagcgccgacgacatctgggcgcagatccgtctcgcg
tacgaacagaactacacgaacaccggcagcaagctcgtcgacgcactcggcgaccagccg
cccgacccggtgctgttcagccaggccgccaatacgccgccgctactgctcgcgcgcggc
gtcggaccggatgcgcaatcgcatcagctggcgctgctcgcgatcacgcgcatggcgcgc
aacgatccggccatggccgcggccacgttcgcgtcggtcgcgccgtcgctgaattcgccg
gagcgcgcgatcggctggggcacgatcggctatcagggtgcgctcaagcagatgcctggc
gcggttgactggttccggctgtcggcgaacgcgccgctgtcgaatcccgcgtatgagtgg
cgcacgcgcagtgcattgctcgccggcgactggaacatggcgcgctggtcgatcgagcag
atgcccgagtcgctgcgcaagcagccgtcgtgggtgtattggcacgcgcgcgcgctgaag
caggccggcgacacggccacggccaaccaggaattccagtcgatcgcgtcgaacttcaac
ttctacggccagcttgcgctcgaagaactcggccagaagatcaccgtgccgccgaaaacc
acggtcaccgacgccgaagtgcaacaggccggcaccacgccgggcttcgatctggcgcag
cgcttctatgagctgaatctgcggctcgaaggcaatcgcgagtggaactggccgctgcgc
ggcatgaccgaccggcaactgctggcggccgccgagtacgcgcgccgcatcgagctgtac
gaccgcaccgtcaacaccgcggaccgcacgaagagcgagcacgatttttcactgcgctat
ctatcgccgttccgcaacatcgtcgagcaggacgcgcagtcgagcgggctcgacgtcgag
tgggcgtacgggctgattcgccaggagtcgcgcttcatcatcaacgcgcgctcggacgtc
ggcgcgggcggactgatgcagctgatgcccgccaccgcgcaactggtcgcgaagaaaatc
ggtctgggcccgctctcgcgcgagcagatgaacgacatcaacaccaacatcctgctcggc
acgaactacctggcgatgatctacaatcagttcgacgggtccgccgtgctggccaccgct
ggctacaacgcaggtccgggccgtccgcgcaactggcggcagtcgctgcagcgcccggtc
gaaggcgcggtgttcgccgaggcgattccgttccaggaaactcgcgactacgtcaagaat
gtgctgtccaacacggtctactacgcggcattgttcgaaggccgtccgcaatcgctgaag
gcgcgcctgggttacatcgcaccgtaa
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