Paraburkholderia atlantica CCGE1002: BC1002_3096
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Entry
BC1002_3096 CDS
T01217
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BC1002_3096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_3096
Enzymes [BR:
bge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BC1002_3096
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BC1002_3096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
Zn-ribbon_GIR1
DUF5817
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
ADG17141
UniProt:
D5W6Z5
LinkDB
All DBs
Position
1:complement(3421063..3423300)
Genome browser
AA seq
745 aa
AA seq
DB search
MFVRVALDHPLPTLFDYRCGTSEAAVVGTLVSVPFGKRHVVGLVCEVAAHSDVPAERLRD
VDKVCTSCPPVSAHWLALAAFAADYYQRGLGEVALPALPQALRDASRWARLFAPEERYRL
TAEGRRALPDALPARATALRALAQALAQADFLLAADARALHPKALATLDTWQTAGWVTLE
VIDAAAVPAAASLPGTPAPVLPTLTDEQASAVEAIRDADGFAPFLLHGVTGSGKTEVYLR
ALAAILAAKPDAQALVLVPEINLTPQFEAAFRARFAALDASAIVTLHSGLAEGERARNWF
AAHTGRARIVLGTRLAVLASLPRLAIIVVDEEHDPAYKQQEGLRYSARDLAIYRAKQLGV
PVVLGSATPSLESWWQADQGRYKRLTLSRRAVADAALPTVRLIDLEDELRRGRASIEGLS
GPLIAAMKARLERGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHKPERALRCH
HCGWESRIPRSCPECGNVDIAPLGRGTQRVEETLASAVPGARVLRIDADSTRRKGSAQAL
FSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFAQLMQVSGR
AGRAGLPGEVLVQTRYARHALYHALGRHDYVGFANATLAERRDAHLPPFVYQALLRAEGR
TLEAALAFLEKAAAELGQIPAAERVTVYDAVPLTIVKVMHVHRAQLLIESASRAALQATL
RAWQPLLRAVKGVLRWNLEVDPLDI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtccgcgtcgcgctcgatcatccgctgccgaccctgtttgactaccgctgcgga
acatccgaagcggctgtcgtgggcacgctcgtcagcgttcccttcggcaagcggcacgtg
gtgggtttggtctgcgaagtggctgcccacagcgacgtgcccgccgaacgcctgcgggat
gtggataaggtctgcacgtcgtgtccgccggtatcagcgcattggctcgcgctcgccgcg
ttcgccgctgactattatcaacgcggtctcggggaagtagcgctgcccgcgctgccgcag
gcgctgcgcgacgcgtcgcgctgggcgcggctgttcgcgccggaagagcgctatcggttg
acggccgagggccgcagggcattgcctgacgcgttgccggcccgcgcgacggcgctcaga
gcgctcgcgcaagcactcgcgcaagccgacttcctgctcgccgctgacgcgcgcgcgctg
catccgaaggcgctcgcgacactcgacacatggcagaccgccggctgggtgacgctcgaa
gtgatcgacgccgccgccgtgcccgccgcggcttcactgccgggcacgccagcgccggtc
ctgccgactctcaccgacgagcaggcgagtgccgtcgaagcgatccgcgacgccgacggc
ttcgcgccgttcctgctgcacggcgtgacgggcagcggcaagaccgaggtgtacctgcgc
gcactcgccgcgattctggcggccaagcccgatgcgcaggcgctcgtgctggtgccggaa
atcaacctgacgccgcagttcgaggcggcgttccgcgcccgcttcgccgcgctcgacgcc
agcgcgatcgtcacgctgcatagcggcctcgccgaaggcgagcgcgcccgcaactggttc
gccgcccacaccggccgtgcgcgcatcgtgctcggcacacggctcgcggtactcgcgtcg
ctgccgcggctggcgatcatcgttgtcgacgaagagcacgatccggcctacaagcagcag
gagggcttgcgctattcggcgcgcgatctcgcaatctatcgggcgaagcagctcggtgtg
ccggtggtgctcggctcggcgactccatcgctcgagagctggtggcaggccgatcagggc
cgctacaagcggctcacgttgtcgcgccgggccgtcgccgacgccgcgctgccgaccgtg
cgcctgatcgatctcgaagacgagctccggcgcgggcgggcgtcgatagaaggcttgtcg
ggtccgttgatcgccgcgatgaaggcgcggctcgaacgcggcgagcagagcctcgtgttc
ctgaaccgacgtggctacgcgccgcaactcgcctgcgacgcgtgcggctgggtggccggt
tgtccgcgctgcagcgcctacgtcgtgctgcacaagcccgagcgcgcgctgcgctgccat
cactgcggctgggagtctcgtatcccgcgttcgtgcccggagtgcggcaacgtcgatatc
gcaccgcttgggcgcggcacgcagcgcgtcgaggaaacgctcgccagcgcggtgccgggc
gcccgcgtgctgcgtatcgatgccgacagcacccgccgcaagggcagtgcgcaggcgttg
ttctcggatgtgcacgcgggcgaagtcgatattctggtcggtacgcagatgatcgcgaag
ggacacgacttccagcgcgtgtcactggttggcgtcctgaatgccgacaccgcgctgttt
tcgcacgatttccgcgcgagcgagcgcctgttcgcgcagctgatgcaggtgagcggccgc
gctggccgcgccggtctgccgggcgaagtgctggtgcagacgcgctatgcgcgtcacgcg
ctgtatcacgcgctgggtcgccacgactacgtcggcttcgccaatgccacgctcgccgag
cgacgcgacgcgcacctgccgccgttcgtctaccaggcgctgctgcgcgccgaaggccgc
acgctcgaagcggcgctcgcgtttctggagaaggccgccgccgaacttgggcagattcca
gccgccgagcgcgtcacagtgtacgacgcggtgccgcttactatcgtcaaggtgatgcac
gtgcatcgcgcgcagttgctgatcgaaagcgcgtcgcgcgcggcgctgcaggctacgctg
cgcgcgtggcagccgctgttgcgcgccgtcaagggcgtgctgcgctggaatctcgaggtc
gatccgctcgacatctga
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