Paraburkholderia atlantica CCGE1002: BC1002_3139
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Entry
BC1002_3139 CDS
T01217
Name
(GenBank) tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bge03016
]
BC1002_3139
Enzymes [BR:
bge01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
BC1002_3139
Transfer RNA biogenesis [BR:
bge03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BC1002_3139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox
Pyr_redox_2
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ADG17184
UniProt:
D5W738
LinkDB
All DBs
Position
1:complement(3471513..3473480)
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AA seq
655 aa
AA seq
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MTDPLIPAVLAFRDNGSPFSPHYDDIYHSAVGALEQAQYVFLRGNELPERWQSRRTFTVL
ETGFGIGINFLVTWAAWRADPARCERLHFVSTEKHPFSAADLRRVHASTISDPLIAELAD
TLANAWPMLVPGTHRLEFEGGRVVLTLIFADALDSLPALRLRADAFYLDGFAPAKNPELW
SPAVFKALARVAGDDATFSTYSSAGDVKRALTQCGFEYRKVDGFGWKRAMLVGRFAPRWR
VRRYEPPAPFGHDERHAVVIGAGLAGCAVIERLAARGWRVTSLERHGSVAQDASGNPAGV
FHPMISRDDSVASRVTRAGFLYALNRWAALESAGHRLARGDRGLLQIAADDDEARAIGEA
IATFRYPSDYVTPVAAADAARLAGMPLARGGWFFPRGGWIDPASLCAAQFASAGGLLERR
FGVDVARLERCGDRWTVFDIAGKVVARAPVVIVAGAHEAARIAGLRHAPTRSIRGQLSLL
PAGTVAPLALPVIGEGYAVPLVNGVTLTGATYELDDPDTSLRADGHRENLERVAQMLPSF
ADALDDASLTSLCGRVAFRCVTSDRMPMIGQLADEAAAARDAVRLRGAWPLDLPRVDGLY
GAFAYGSRGLVWAALGAELIASQIEGEPWPLERDLAEDIDPARFLLRSLRQGTIG
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccgctgattcccgccgtcctcgctttccgcgacaacggcagccccttttca
ccgcactacgacgacatctatcacagcgcggtcggcgcgctcgagcaggctcaatatgtc
tttctgcgcggcaacgaattgcccgaaagatggcagagccgtcgaacgttcaccgtgctc
gaaaccggctttggcatcggcatcaattttctcgtcacgtgggccgcgtggcgcgccgat
cccgcgcgctgcgagcggctgcatttcgtgtcgaccgagaagcatccgtttagcgccgcc
gatctgcgccgcgtccacgcatcgacgatctccgacccgctgatcgccgaactcgcggac
acgctcgcgaacgcatggccgatgctcgtgcccggtacgcaccggctcgaattcgaaggc
ggccgcgtggtgctgacattgatcttcgccgatgcgctcgacagcctgcccgcattacgg
ctgcgtgccgatgcgttctatctcgatggtttcgcgcccgcgaaaaatcccgagctgtgg
agtccggcggtgttcaaggcgctcgcgcgtgtcgccggcgatgacgcgactttctccacc
tatagcagcgcgggcgacgtcaaacgcgcgttgacgcaatgcggcttcgagtatcgcaag
gtcgacggcttcggctggaaacgcgcgatgctggtcggacgcttcgcgccgcgctggcgc
gtgcgtcgttatgagccgcctgcgccgttcggccacgacgaacgacacgcggtcgtgatc
ggagcgggcctggccggctgcgcagtgatagagcgacttgcggcacgcggctggcgcgtg
acttcgctcgagcggcatgggtcggttgcacaggatgcgtcgggtaatccggccggtgtc
ttccacccaatgatttcgcgcgacgacagcgtcgcgtcgcgcgtcacgcgggcgggtttt
ctgtacgcgctcaatcgttgggccgcgctcgaaagcgcaggacatcggctcgcgcgcggc
gatcgcggcctgctgcagatcgccgcggacgacgacgaggcacgcgcgatcggcgaggcc
atcgccacgtttcgctatccgtccgactacgtgacgccggtcgccgcggccgatgcagca
cgactcgccggcatgccgcttgcgcgtggcggctggttctttccgcgcggcggctggatc
gacccggcctctctctgcgcggcgcaattcgcatcggcaggcggcttgctcgaacgacgc
ttcggcgtcgacgtcgcgcggctcgaacggtgcggcgatcggtggaccgtcttcgatatc
gcgggaaaggtggtcgcgcgagcgccggtcgtgatcgtcgcgggtgcgcatgaagctgcg
cgcatcgctggcttgcgtcatgcgccgacccgcagcattcgcggtcaattgagcttgctg
ccggcagggaccgtcgcgccgctcgcgctgccggtgatcggtgagggctatgcggtgccg
ctcgtgaacggtgtcacgctgacaggcgcgacctatgagctcgacgaccccgacacgtcg
ctgcgcgcggacggtcatcgcgagaatctcgagcgtgttgcgcagatgctgccgtcgttc
gcagacgcactcgatgacgcgtcgttgacctcgctctgcggacgcgttgcgtttcgctgc
gtgacctcggaccgcatgccaatgatcggccagctcgccgacgaagccgctgccgcacga
gatgccgtccgcctgcgcggcgcatggccgctcgatctgccgcgcgtcgacggtctgtac
ggcgcattcgcttatggttctcgcgggctggtgtgggccgcgctcggcgctgaactgatc
gcgtcacagatcgaaggcgagccgtggccgctcgaacgcgatctcgccgaagacatcgac
cccgcccgctttctgctgcgttcgttgcggcaggggacgatcggataa
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