Paraburkholderia atlantica CCGE1002: BC1002_3161
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Entry
BC1002_3161 CDS
T01217
Name
(GenBank) AlkA domain protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BC1002_3161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_3161
Enzymes [BR:
bge01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BC1002_3161
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BC1002_3161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
AfAlkA-like_TBP-like
Motif
Other DBs
NCBI-ProteinID:
ADG17206
UniProt:
D5W760
LinkDB
All DBs
Position
1:complement(3496158..3497078)
Genome browser
AA seq
306 aa
AA seq
DB search
MSTLNDVATLELPFNAPFDWPRLLRFFSGRATPGVEAVEDGAYRRAIDWDGDSGTLSVRL
HPRKRCIVASIDGPASRHADALAAPIAKMFDLRADPKKIAAGLASDPWLAPLVAAVPGLR
VPGAWSGFELVVRAIVGQQVSVKAATTIIGRLVQRAGERIDGHPHQNTAWRFPTPAALAE
VDLAQIGMPGKRVAALQGFARAVASGDVPLDSSDTVDAAGLRAALLALAGIGPWTVEYVA
MRAWRDPDAWPASDLVLMQSISARDPSLVRPAQQRSRTDAWRPYRAYAAMHLWNEVADRA
GAARGG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacgcttaacgacgtcgcaactctcgaattaccgttcaacgcaccgttcgactgg
ccgcggctgctgcgctttttcagcggccgcgcgacgcctggtgtagaagccgtcgaagac
ggcgcgtatcgtcgcgcgatcgactgggacggcgacagcggcacactcagcgtgcgcttg
catccgcgcaagcgctgcatcgtcgctagcattgacgggccggcgagccggcatgccgat
gcactcgccgcgccaatcgcgaagatgtttgatctgcgcgccgatccgaagaagatcgcc
gccggactcgcctccgacccgtggctcgcgccgctcgtcgccgcggtgcctggcctgcga
gtgccgggcgcgtggtccggcttcgaactggtggtgcgtgcgatcgtcggtcagcaggtc
agcgtgaaggccgcgacgaccatcatcggacggctcgtgcagcgcgcgggcgaacgcatc
gacgggcatccgcatcagaacaccgcgtggcgttttccgacgccggccgcgctcgccgaa
gtcgatctcgcgcagatcggcatgcctggtaaacgcgtcgccgcgttgcaaggcttcgcg
cgcgcggtcgcgagcggcgacgtgccgctcgacagcagcgataccgtcgacgccgccggc
ctgcgggccgcgttgctcgcgctcgcgggcatcggcccatggaccgtcgaatacgtcgcg
atgcgcgcatggcgcgatcccgatgcatggcccgcgtcggatctcgtgctgatgcaatcg
atcagcgcgcgcgatccttcgctggtacggcccgcgcagcagcgcagtcgcaccgacgcg
tggcggccctatcgcgcgtatgccgcgatgcatctgtggaacgaggtagcggatcgggcg
ggcgcggcgcgcggcgggtga
DBGET
integrated database retrieval system
