Paraburkholderia atlantica CCGE1002: BC1002_3180
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Entry
BC1002_3180 CDS
T01217
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bge03016
]
BC1002_3180
Transfer RNA biogenesis [BR:
bge03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BC1002_3180
Prokaryotic type
Methyltransferases
BC1002_3180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Ras
Arf
Roc
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADG17225
UniProt:
D5W779
LinkDB
All DBs
Position
1:complement(3513936..3515330)
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AA seq
464 aa
AA seq
DB search
MLTTDSDPIVAIATAPGRGGIGVVRISFGRAGAAAAQPLMQALTGQTLTARHASYVPFLD
ASGNPLDRGIALYFPAPHSYTGEHVLELQGHGGPVVLQLVLQRCIDAGRAFGLRLAEPGE
FTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVEEVITLRMLV
EATLDFPEEEIDFLEAADARGKLARIRERLAHVLSEARQGALLREGLSVVLAGQPNVGKS
SLLNALAGAELAIVTPIAGTTRDKVAQTIQIEGIPLHVIDTAGLRDTEDEVEKIGIERTW
GEIERADVVLHLLDARAGMTTDDETIAGRFPRGVPVVRVLNKTDLTGLAPATQALDADLE
LSEVRLSAKQGDGVALLRDELLRIAGWQAGAESVYLARERHLIALRAADEHLATAAAHAE
QNAQALDLFAEELRLAQDQLNSITGEFSSDDLLGVIFSRFCIGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgaccgactccgaccccatcgttgccattgctaccgcgcccggccggggaggc
atcggcgtcgtgcggatttcgttcggccgcgccggcgcggcggcggcccagccgttgatg
caggcgctcaccggccagacgctcactgcgcgtcacgcgagctatgtaccgtttctcgac
gcgagcggcaatccgctcgatcgcggcatcgcgttgtactttccggcgccgcattcgtac
accggcgagcacgtgctcgaactgcagggccatgggggcccggtcgtgctgcagttggtc
ctgcagcgctgcatcgacgccggccgcgcgttcggtctgcggctcgccgagccgggcgaa
ttcacgcgtcgcgcgtttctgaacgacaagctcgacctcgcgcaggccgaagccgtcgcc
gatttgatcgaggcgagcaccgaggcggccgcgcgttcggccggccgctcgctcgacggc
gcgttctcgcgcgacatccacgcgctggtcgaagaagtgatcacactgcggatgctggtc
gaagcgacgctcgacttcccggaagaggaaatcgactttctcgaagccgccgacgcgcgc
ggcaaacttgcgcgcattcgcgagcgtctcgcgcatgtgctgagcgaggcgcgccaaggg
gcgttgctgcgcgagggtttatcggtcgtgctggcggggcagccgaacgttggcaaatcg
tcgctgctgaatgcgctcgctggcgccgaactcgcgatcgtcacgccgatcgccggcacg
acgcgcgacaaggtcgcgcagacgatccagatcgaaggcatcccgctccacgtgatcgac
acggcgggcctgcgcgacaccgaggacgaggtcgagaagatcggcatcgagcgcacgtgg
ggcgagatcgagcgcgcggacgtggtgctgcatctgctcgatgcgcgcgccggcatgacg
accgacgacgaaacgatcgccggacgctttccgcgcggcgtgccggtcgtgcgcgtgttg
aacaagaccgacctgaccggactcgcgcccgcgacgcaggcactcgacgccgatctcgaa
ctcagcgaggtgcggctgtcggcgaagcagggtgacggcgtcgcgttgctgcgcgacgaa
ctgctgcggattgccgggtggcaggctggcgcggagagcgtctatctcgcgcgcgagcgg
catttgatcgcattacgcgctgccgacgagcatctggcgaccgccgccgcgcatgcggag
cagaacgcgcaggcgctagatttgttcgccgaggaattgcggctcgcgcaggatcagttg
aattcgatcacaggtgagttcagttcggacgatctgctcggagtgattttcagccggttc
tgtattggcaagtaa
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