Paraburkholderia atlantica CCGE1002: BC1002_3379
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Entry
BC1002_3379 CDS
T01217
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bge03000
]
BC1002_3379
Transcription factors [BR:
bge03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BC1002_3379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_AsnC-type
HTH_24
HTH_5
MarR
Motif
Other DBs
NCBI-ProteinID:
ADG17413
UniProt:
D5WFM3
LinkDB
All DBs
Position
2:complement(200005..200952)
Genome browser
AA seq
315 aa
AA seq
DB search
MTMRNATLRQLKVFETVARHLSFSRAAEELHLTQPAVSTQVRQLEEHAGLPLFEQLGKKI
YLTPAGTEMLHYSRAIMQQFHEVDEAMSQLKGVSGGKLNVAVISAGDYFFPRLLAEFTRR
YSGVDLNLAVHNREELLHQLATNQTDLAVMVRPPHETDATNEPFAPHPYVIVAAPTHPLA
HKRNIRFSQLANEAFIVRERGSDTWNSMEEGFAGRLSNLKIAMEIKSTETIKQAVIAGMG
IAFLSAHTISLELQLGHLVVLDVESFPVMLNWYVVHRKNKRLPPVAVAFKRFLMEEGASL
IEKITRVKELSVHKP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcgcaatgcaactctgcggcaactgaaggtctttgaaacggtggcgcgccac
ctgagtttttcgcgcgccgcggaggaattgcatctgactcagccggccgtttccactcag
gtccggcaactcgaagaacatgcggggctgcctctgttcgagcaactcggcaaaaagatc
tatctgacgccggccggcactgaaatgctccactacagccgcgcgatcatgcagcagttc
catgaagtcgacgaagcgatgagtcagttgaagggcgtctccggcggcaagctgaatgtc
gccgtgatcagtgccggcgactatttctttccgcgccttctcgccgaattcacgcgtcgc
tattcgggtgtggatctgaatctggcggtgcacaaccgcgaagaactgctgcatcaactg
gcgaccaatcaaaccgacctcgcggtcatggtgcgtccgccgcacgaaaccgacgcgacc
aatgaaccgttcgcgccgcatccgtacgtgatcgtcgcggcgcccactcatccgcttgcg
cacaagcgcaatatccgcttcagtcagctcgcgaacgaagcgttcatcgtgcgcgaacgc
ggctcggatacatggaattcgatggaagaaggttttgccggccgtctgtccaatctgaag
atcgcaatggagatcaagagcaccgagacgatcaagcaggcggtcattgccggaatgggc
atcgcgtttctgtccgcccatacgatcagcctcgaattgcagttgggtcatctggtcgtg
ctcgacgtcgagagctttccggtgatgctcaactggtatgtcgtgcatcggaaaaacaag
cgtctgccgccggtggccgtcgccttcaaacgcttcctgatggaggaaggcgccagtctg
atcgaaaagatcacgcgcgtgaaggaactgagcgtgcataagccttaa
DBGET
integrated database retrieval system
