Paraburkholderia atlantica CCGE1002: BC1002_3790
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Entry
BC1002_3790 CDS
T01217
Name
(GenBank) SNF2-related protein
Organism
bge
Paraburkholderia atlantica CCGE1002
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
ADG17808
UniProt:
D5WH63
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Position
2:644539..648057
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AA seq
1172 aa
AA seq
DB search
MSSVFFDRDSIAEWLGERTVAKARSVGAISNVKWQGETLSGDVQGSQPQPYRTRVRFRTD
GGSPWAEGECTCPVGRNCKHVAALLLAELDYHDEMDHITQVEEDSDPATSEVFVGRRITV
PGAPPAPSPSPSSSPGVRPELVSWLERFRARARAADAAAEKNAARKLEAPSKETLAYRLN
WSRFHLRHEVVLHRARCDADGVIVEVGDSWGDVEGALLRQPRFVSDEDLSILRGLWLGRS
REDMGQFVLRGTSGAETLQKLIATGRLFFDFRTAPGQAGPTPLARAADRPGRIEWEPLAD
ERLRPVLRTEPRASMVLPTEPVWYVDGVANEAGVVPLSLPFQQLPDYLAMPPISLAEAPL
VASVLREIAPELPLPPTHDAPAIRVIDVEPVPVLTLNSHALPGTAKGMKAAKTAKTAKAA
KAAERKSAAVELAAASFDYDGVSINADSSVTLVPLPGGDVIHIRRRYDAEKKRLLELRKT
GLQKVPTRNMQAARLLPDTMLGLPDSDAWSEFVNDAIPDLVAKGWRVTMAPEFRYNVIEI
DAIDGTAQQAGDGWFDLEMGIRVGERNVRLEPLLADLFRRDRRWLSGALESIRDDEPIEL
KTEENKRLRLRADRLKPVVRVLVDLFDSLGGALAEGAPLRVPAVDAGRLDALHDTGRWQF
SGDASIRDLARRLQAGPGLREVPVPRGLKAELRAYQHQGLNWMQFLREQDLAGVLADDMG
LGKTVQTLAHILAEKEAGRLTQPALIVVPTTLVHNWREEARRFAPDLRVLALNGPHRKER
FEQIGEHELILTTYALLWRDQKVLAEHDYHLLILDEAQYVKNATTKAAQAIRGLRARHRL
CLTGTPLENHLGELWSQFDFLLPGFLGSQKDFTRRWRNPIEKNGDDVRRALLARRIRPFM
LRRRKDEVAKELPPKTTIVCPVDLEGAQRDLYETVRTAMQQKVRAAVSAQGLARSHIIVL
DALLKLRQVCCDPRLVRTASGFTDGAATGGGERAMRSAKLDLLLSMLPELIEEGRRVLLF
SQFTGMLALIAQALDEAAIPYAMLTGDTTDRVTPVERFQQGEVPLFLISLKAGGVGLNLT
AADTVIHYDPWWNPAAENQATDRAHRLGQDKPVFVYKLIAAGSIEEKIVELQEHKAGLAD
SILAEDAAGAAKFSDDDLDALFAPMPEIEGGR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagttttcttcgatcgggacagcattgccgaatggctcggtgagcggaccgtc
gccaaggcgcgctcggtgggcgcgatcagcaacgtcaaatggcagggcgagacgctgtca
ggcgacgtgcagggctcgcagccacagccttaccgcacacgggtccgctttcggaccgat
ggcgggtcgccgtgggccgaaggcgaatgcacgtgcccggtcgggcgcaattgcaagcac
gtcgcggcgttgctgctcgcggaactcgactaccacgacgagatggatcacatcacgcag
gtcgaggaagacagcgatccggccacgtcggaggtgttcgtcgggcgacggatcacggtc
ccgggcgcgccgccggcgccgtctccatctccatcttcatctccgggcgtgcggcccgaa
ctggtcagctggctcgaacgttttcgcgcgcgcgcccgcgcggccgacgccgccgccgaa
aaaaatgccgcccgcaagctggaggccccgagcaaggagacgctcgcctatcggctcaac
tggtcgcgttttcatctgcgccacgaagtcgtgctgcatcgcgcgcgttgcgacgcggac
ggcgtgatcgtcgaagtcggcgacagctggggcgacgtcgaaggcgcgctgctcaggcag
ccgcgcttcgtgtccgacgaagacctgtcgattctgcgcggcctgtggctcggccgctcg
cgcgaggacatgggccagttcgtgctgcgcggcaccagcggcgcggaaacgctgcaaaag
ctgatcgcgaccgggcgcctgttcttcgacttcaggaccgcgccgggccaagctgggccg
acaccgctcgcgcgcgccgccgaccggcccggccgcatcgaatgggagccgctcgccgac
gagcgtctgcgcccggtgctgcgcaccgaaccgcgcgcgagcatggtgctgccgaccgag
ccggtctggtacgtggacggcgtcgccaacgaggcgggcgtcgtaccgctgtcgctgccg
ttccagcaattgcccgactacctcgcgatgccgccgatctcgctcgccgaggcgccgctc
gtcgcgtcggtgctgcgcgagatcgcgcccgagctgccgctgccgccgacccatgacgcg
cccgcgattcgcgtgatcgacgtcgagccggtgcccgtgctgacgctgaacagccacgcg
ctgccaggtacggcgaagggcatgaaagcggcgaagaccgcaaaaaccgcgaaggcagca
aaagccgcggagcgcaagtccgccgcggtcgaactggccgcggcgagcttcgactacgac
ggcgtcagcatcaacgccgacagcagcgtgacgctcgtgccgctgccgggcggcgacgtg
attcacatccgccggcgctacgacgccgagaaaaagcgcttgctggaattgcgcaagacc
ggtctgcagaaggtgccgacgcgcaatatgcaggcggcgcgtctgttgcctgacacgatg
ctcggcctgcccgacagcgacgcgtggtccgaattcgtcaacgacgcgataccggatctg
gtcgcaaagggctggcgcgtgacgatggcgcccgagttccgctacaacgtgatcgagatc
gacgcgatcgacggcaccgcgcagcaagccggcgacggctggttcgatctggagatgggc
atccgcgtcggcgagcgcaacgtgcggctcgagccgctgcttgccgatctgttccgacgc
gaccggcgctggctgtctggcgcgctggagagcatccgcgacgacgagccgatcgagctg
aagaccgaggagaacaagcgcctgcggttgcgcgccgatcgtttgaagccggtggtgcgg
gtgctggtcgatctgttcgattcgcttggcggcgcgcttgccgaaggcgcgccgctgcgc
gtgcccgcggtcgatgccggccgcctcgatgcgctgcacgacaccggccgctggcagttc
agcggcgacgcttcgatccgcgacctcgcgcgccgtctgcaagccggaccgggcttgcgc
gaagtgccggtgccgcgtggtctgaaggcggagctgcgcgcgtatcagcaccaaggcctg
aactggatgcagtttctgcgcgaacaggatctggccggcgtgctcgccgacgacatggga
ctcggcaaaaccgtgcagacgctcgcgcacattctcgcggagaaggaagcgggacgactt
acgcagcccgcgctgatcgtcgtgccgaccacgctggtgcacaactggcgcgaggaagcg
cgccgctttgccccggacctgagggtgctggcgctgaacgggccgcacagaaaggagcgc
ttcgagcagatcggcgaacacgagctgatcctgaccacgtatgcgctgctgtggcgcgat
cagaaggtgcttgctgagcacgactatcatctgctgatactcgacgaggcgcagtacgtg
aagaacgcgaccaccaaggccgctcaggcgattcgcggcttgcgggcgcggcatcggctg
tgtctgacgggcacgccgctcgagaatcatctcggcgagctgtggtcgcagttcgatttt
ctgctgccgggctttctcggcagccagaaggacttcacgcgacgctggcgcaacccgatc
gaaaagaacggcgacgacgtgcgccgcgcgttgctcgcgcgccgcatccggccattcatg
ctgcgccgtcgcaaggacgaggtcgcgaaggaactgccgccgaagacgacgatcgtgtgt
ccggtcgatctggaaggcgcgcagcgcgacctgtacgaaaccgtgcgcacggcgatgcag
cagaaggtgcgcgcggcggtcagcgcgcaagggctcgcgcgcagccacatcatcgtgctc
gatgcgttgctgaagctgcgccaggtgtgctgcgatccgcggctcgtgcgcaccgcgagt
ggcttcactgacggcgctgcgacgggcggcggcgagcgcgcgatgcgctcggccaagctc
gatctgctgctgtcgatgctgcccgagctgatcgaggaggggcgtcgcgtgctgctgttc
tcgcagttcaccggcatgctcgcgctgatcgcccaggcgctcgacgaggccgcgatcccg
tacgcgatgctgacgggtgatacgaccgatcgcgtaacgccggtcgagcggtttcagcag
ggcgaggtgccgctgttcctgatcagcctgaaagcgggcggagtgggcctgaacctgacc
gccgccgacacggtgatccactacgacccgtggtggaatccggccgccgaaaaccaggcg
accgaccgcgcgcatcggctgggacaggacaagccggtattcgtctacaagctgatcgcg
gccggcagcatcgaggaaaagatcgtcgagctgcaggaacacaaggccgggctcgccgac
agcattctcgcggaagacgcggcgggtgccgcgaagttctcggacgacgatctcgatgcg
ctgttcgcgccgatgccggaaatcgagggcgggaggtga
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