Paraburkholderia atlantica CCGE1002: BC1002_3849
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Entry
BC1002_3849 CDS
T01217
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge00260
Glycine, serine and threonine metabolism
bge00460
Cyanoamino acid metabolism
bge00630
Glyoxylate and dicarboxylate metabolism
bge00670
One carbon pool by folate
bge00680
Methane metabolism
bge01100
Metabolic pathways
bge01110
Biosynthesis of secondary metabolites
bge01120
Microbial metabolism in diverse environments
bge01200
Carbon metabolism
bge01230
Biosynthesis of amino acids
bge01240
Biosynthesis of cofactors
bge04981
Folate transport and metabolism
Module
bge_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BC1002_3849
09102 Energy metabolism
00680 Methane metabolism
BC1002_3849
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BC1002_3849
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BC1002_3849
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BC1002_3849
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BC1002_3849
Enzymes [BR:
bge01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BC1002_3849
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Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ADG17861
UniProt:
D5WHB6
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All DBs
Position
2:718846..720120
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AA seq
424 aa
AA seq
DB search
MSNPNPFFEDSLPARDPAVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYA
EGYPGKRYYGGCEYVDEIETLALDRIKQLFNAKFANVQPHSGAQANGAVMLALTKPGDTV
LGMSLDAGGHLTHGAKPALSGKWFNAVQYGVRCDTMLIDYEQIEELAQQHKPTLLIAGFS
AYPRALDFARLRAIADGVGAKLMVDMAHIAGVIAAGRHDNPVPHAHVVTSTTHKTLRGPR
GGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALQPGFKTYIDSVLANARA
LGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDTEKPT
VTSGIRLGTPAGTTRGFGVSEFREVGRLIVEVLDALRTSAEGDAATEQRVRREIFALCDR
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccgaatcccttcttcgaagactcgctgccggcgcgcgatccggcggtgcgc
ggcgccattctgaaagagctcgagcgtcagcagtcgcaagtcgagctgatcgcgtcggaa
aacatcgtgtcgcgcgcggtactcgacgcgcagggctcggtgctgaccaacaagtacgcg
gaagggtacccgggcaagcgctactacggcggttgcgaatacgtcgacgagatcgagacg
ctcgcgctcgatcgcatcaagcagcttttcaatgcgaagttcgcgaacgtgcagccgcat
tccggcgcgcaagcgaatggcgcggtgatgctcgcactgacgaagccgggcgatacggtg
ctcggcatgtcgctcgacgcgggcgggcatctgacgcatggcgcgaagcccgcgttgtcg
ggcaagtggttcaacgcggtgcagtacggcgtgcggtgcgacacgatgctgatcgactac
gagcagatcgaggaactggcgcaacagcacaaaccgacgctgctgatcgcgggcttttcc
gcctatccgcgcgcgctcgacttcgcacggctgcgcgcaatcgccgacggcgtcggtgcg
aagctgatggtggacatggcgcatatcgcgggcgtgatcgcggccggccgtcatgacaat
ccggtcccgcatgcgcacgtggtcacgtcgaccacccacaagaccctgcgcggtccgcgc
ggcggcttcgtgctgaccaacgacgaagagatcgcgaagaagatcaactccgccgtgttc
cccggcttgcagggcggaccgctgatgcatgtgatcgccggcaaggcggtcgcgttcggc
gaggcgctgcagccgggcttcaaaacctatatcgacagcgtgctcgccaacgcgcgggcg
ctcggcgacgtgctgaaagcgggcggcgtcgatctggtgacagggggcaccgacaaccat
ctgctgctggtcgatctgcggccgaaggggctcaagggcaatcaggtcgaacaggcgctg
gagcgcgcgggcatcacctgcaacaagaacggcattccgttcgatacggagaagccgacc
gtcacgtccggcattcgcctcggcacgccggcgggcacgacgcgcggctttggcgtcagc
gagtttcgcgaggtcgggcgtctgatcgtcgaggtgctcgatgcgctgcggacgtccgcc
gaaggcgacgccgcaaccgaacaacgcgtgcgccgcgagattttcgcgctgtgcgaccgc
tttcccatttactga
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