Paraburkholderia atlantica CCGE1002: BC1002_4000
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Entry
BC1002_4000 CDS
T01217
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
bge
Paraburkholderia atlantica CCGE1002
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
VpsR
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_17
AbiEi_4
HTH_23
AAA
HTH_7
Mg_chelatase
HTH_28
AAA_16
HTH_29
Xre-like-HTH
DUF134
HTH_3
HTH_IclR
HTH_31
AAA_22
HTH_Tnp_1
AAA_2
HTH_22
HTH_30
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ADG18008
UniProt:
D5WHR3
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All DBs
Position
2:882389..883816
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AA seq
475 aa
AA seq
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MTTTCTPADTERTVLYVANAPDQKLVEFLAASGWQAVHAKSTAVAERMIERGNIKVGLVQ
LPEDCTSQQLSAFALCMRRVETNWVAQIVPGQADNELVSRFILDYCFDFVTQPWLNERLV
FALGHAHGLSSLRQPRVAPEPSVGRHGMVGQCEPMQQLYRRIDKCGVTDAPVFIAGESGT
GKELTARAIHDRSPRAGRTFVAINCAAIPPSLLQAELFGHERGAFTGALQRKIGRIESAH
EGTLFLDEIGDMPHECQAVLLRFLQEGTIERLGGNGPISVDVRVISATHVDLERAVEDGR
FRSDLYHRLCVLRLVEPPLRERGGDIKLLANYALSMYKQDGARKLRGLSSDAIVAMSNYP
WPGNVRELINCVRRAVVMSEGRFITASDLGLPEADNGPAVTLAEIRSKAEKDAIENALLR
HGYKLSDAAAELGISRATLYRLMHANRLHQEPAGRGASSGPDAGDEAERQTSSVA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgactacgacttgcacgccggccgacaccgaacgcacggttctgtacgtggcaaacgca
cccgaccagaaactcgtcgagtttctggccgcgtcgggatggcaagccgtgcacgcaaaa
agcacggccgtcgcggaacgcatgatcgaacgcggcaatatcaaggtcggtctcgttcag
ttgcccgaagattgcacgtcccagcagctgtccgcgttcgcgctgtgcatgcgccgcgtc
gagaccaactgggtcgcgcagatcgtgccgggccaggccgacaacgaactggtcagccgt
ttcatcctcgattactgcttcgacttcgtcacgcagccgtggctcaacgagcggctcgtg
ttcgcgctcggccacgctcatgggctgtcgagcctgcgtcagcctcgcgtcgcgccggag
ccgtcggtcggccgtcacggcatggtcggccaatgcgagccgatgcaacagctctaccgg
cgcatcgacaaatgcggcgtaaccgacgcgcccgtcttcatcgcgggtgaatcgggcacc
ggcaaggagctgaccgctcgtgctattcatgaccgctcgccgcgcgcgggccgcaccttc
gtcgcgatcaattgcgcggcgattccgccgagcctgttgcaagccgaactgttcggccac
gagcgcggcgcgtttaccggcgcgctgcaacgcaaaatcggccgcatcgagagcgcgcat
gaaggcacgctgtttctcgatgaaatcggcgacatgccgcacgagtgccaggcggtgctg
ctgcgcttcctgcaggaaggcacgatcgagcggcttggtggcaacggtccgatcagcgtc
gacgtgcgcgtcatctcggcgacccacgtcgacctggagcgcgccgtcgaagacgggcgc
ttccgctccgacctctatcaccggctgtgcgtgctgcgcctcgtcgagccgccattgcgc
gagcgcggcggcgacatcaagctgctcgccaattacgcgctcagcatgtacaagcaggac
ggcgcgcgcaagctgcgcgggctgtcgagcgacgcgatcgtcgcgatgtcgaactatccg
tggcccggcaacgtgcgcgagctgatcaactgcgtgcgtcgcgcggtcgtgatgagcgag
ggccgcttcatcaccgcgagcgacctcggcctgcccgaggccgacaatggcccggccgtc
acgctcgcggaaatccgcagcaaggccgaaaaggatgcgatcgagaacgcgctgctgcga
cacggctacaagctgtccgatgcggccgccgaactcggcatatcgcgcgcgacgctgtac
cggctgatgcacgcgaaccggctgcatcaggagccggccggacgcggcgcgagcagcggt
cccgatgccggcgacgaagccgagcgccagacctcgtcggtggcataa
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