KEGG   Paraburkholderia atlantica CCGE1002: BC1002_4294
Entry
BC1002_4294       CDS       T01217                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
bge  Paraburkholderia atlantica CCGE1002
Pathway
bge03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bge00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BC1002_4294
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bge02044]
    BC1002_4294
Secretion system [BR:bge02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BC1002_4294
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 nSTAND3 AAA_16 AAA_24 AAA_7 Sigma54_activat Clp_N NACHT IstB_IS21 TniB ATPase_2 AAA_25 T2SSE NBD_SMAX1 CxC7 Hpr_kinase_C Mis12
Other DBs
NCBI-ProteinID: ADG18279
UniProt: D5WII4
LinkDB
Position
2:1191903..1194620
AA seq 905 aa
MTLRNDRRSAFCNTTQLLRRLNPHCARALEAAASLCQTRLADEITVEHWLLKLIEAGDGD
ILAVLRHYTIDIDALWDALLGAIDRLPRNLRGKPALSPQLAALLADAWLHASSESDDARI
RSGNLLQAIVDAPHILRAQHAWPLLAVSSAQIERLLPRIAHRSCESESESESEDDERQPE
RPQPSATASAANVVCRAKEVTPASANALARFAFDLTDKARRGDIDPVFGRNREIQQMVDV
LARRRKNNPILVGEPGVGKTALVEGLALRVVDGSVPNVIRDVRILTLDLGLLQAGAGVKG
EFEQRLKNLIDEVQASPVPILLFIDEAHTLIGAGNAAGGADAANLLKPALARGELRTIAA
TTWSEYKQFFERDAALERRFQIIKVDEPDDDAACLMLRGLKTRYAQHHHVHIRDEALVAA
VKLSRRYIPARQLPDKAVDLIDTAAARVRMGLDTPPAELQRARAMVAALGLEHATLADDE
RAGIDDVEARRGALDAALANAKTELAALQTRYEQELELVQALHRQRDSEAATRDATAFAQ
ARRALTTAQGKTPLIFRDVDAQAIARVVAEWTGVPVGSLVEDELQSLLTLEKQLATRVVA
QHDALAALSESLRTAKAGLKNEHAPLGVFLLAGPSGVGKTETALALADLLFGGEAALTTI
NMSEYQESHTVSQLKGSPPGYVGYGRGGVLTEAVRQRPYSVVLLDEVEKAHRDVLDMFYQ
VFDRGMMRDGEGREIDFRNCVVLMTSNLGSAQIDETTAENPDVSHNELLDAIHPQLVRHF
QPALLARFQTLVYRPLDASALASIVRLKLAKVAQRLYRQHGVELNCDDALIDAMAELCLA
RETGARNVDAFLNQRILPSLSRELLARMACETAPAKILLTSSPEGKLTIDFFDREQAVAD
HAANG
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgaccttgcgcaacgaccgaagaagcgccttttgtaacaccacccagctgctgcgccgg
ctgaacccacactgcgcacgggcgctcgaagcggccgccagtctttgccagacgcggctg
gctgacgagatcacggtcgagcactggctgctgaagctgatcgaagccggcgatggcgac
atcctcgctgtcctgcggcattacacgatcgatatcgacgcgctgtgggatgcgctactc
ggtgcaatcgatcgcctgccgcgcaatctgcgcggcaagcccgcgctgtcgccgcagcta
gcggcactgctagcggatgcatggcttcacgcgtcgtcggagagcgacgacgcgcgaatc
cgctccgggaatctgttgcaggcgatcgtcgatgcgccccacatactccgcgcgcagcat
gcgtggccattgcttgccgtcagcagcgcgcagatcgagcgtttgctgccgcgaattgcg
catcggtcgtgcgaaagtgaaagcgaaagcgaaagtgaagatgacgaacggcaacccgaa
cggccgcaaccttcggcgaccgcctcggcggcgaacgtcgtctgtcgcgcaaaggaggtc
acacccgccagcgccaacgccctcgcccgcttcgcgttcgacctgaccgacaaggcgcgc
cgcggcgacatcgatccggtattcgggcgcaaccgcgagatccagcagatggtcgacgtg
ctcgcgcgccgtcgcaagaacaatccgatcctcgtcggcgagccgggggtcggcaagacc
gcgctcgtcgaagggctcgcgttgcgagtcgtagatggcagcgtgccgaacgtgatccgc
gacgtgcgcatcctcacgctcgatctcggcttgctgcaagccggcgccggcgtaaaaggc
gaatttgagcaacgcctgaagaacctgatcgacgaggttcaggcttcgcccgtgccgatc
ctgctgttcatcgacgaagctcacacgctgatcggcgccggcaacgccgcgggcggcgcc
gacgccgcgaacctgctgaagccagcgctcgcgcgcggcgaattgcgcacgatcgcggcg
accacgtggtccgaatacaagcaattcttcgagcgcgacgccgcactggaacgccgcttc
cagatcatcaaagtcgacgaacccgacgacgacgcggcctgcctgatgctacgcggcctg
aaaacccgctacgcccagcaccatcacgtgcacattcgcgacgaagcactggtcgccgca
gtcaagctgtcgcgccgctacataccggcacggcagttgccggacaaggccgtcgatctg
atcgacaccgcggccgcacgcgtacgcatggggctcgacacaccgccggccgaattgcaa
cgcgcgcgtgccatggttgccgcgctggggctcgaacacgcgacgctcgcagacgacgaa
cgcgccggcatcgacgatgtcgaagcgcgccgcggcgcgctggacgccgcgctcgcgaac
gcgaagaccgaactcgcggcgctgcaaacacgttacgaacaggagctcgaactcgtccag
gcgctgcaccgccaacgcgacagcgaggccgcaacccgcgatgccaccgcgttcgcgcaa
gcacgtcgcgcactcacgaccgcgcaaggcaagaccccgttgatcttcagggacgtcgac
gcccaggcaatcgcacgcgtcgtcgccgagtggaccggcgtgccggttggcagcctcgtc
gaagacgaactgcaaagcctgctgacactggagaagcagctcgcgacacgcgtggtcgcg
cagcatgacgcgctcgctgcgctgtccgaaagcctgcgcaccgccaaggcggggctcaag
aatgaacatgcgccgctcggcgtgtttctgcttgctggaccatcgggcgttggcaagacc
gaaactgcgcttgcgctcgccgatttgctgttcggcggtgaagccgcgctgacgacgatc
aatatgtccgagtaccaggaatcgcacacggtgtcgcaattgaagggctcgccgccaggc
tacgtcggatatggacgcggcggcgttctgaccgaggcggtgcggcagcgtccgtatagc
gtcgtgctgctcgacgaagtcgaaaaagcgcaccgcgatgtgctcgacatgttttatcag
gtgttcgatcgcggcatgatgcgcgacggcgaggggcgcgagatcgactttcgcaactgc
gtggtcctgatgacgtcgaatctcggcagtgctcaaatcgacgaaacgaccgcggaaaac
cccgacgtctcgcacaacgaactgctcgacgcgatccatccgcagctcgtcagacacttc
caacctgcgctgctcgcgcgtttccagacgctcgtgtaccgccctctcgacgcgagcgcg
ctggcgtcgatcgtgcgcctgaagctcgctaaagtcgcgcaacgtctataccgtcagcac
ggcgtcgaactgaactgcgacgatgcgctgatcgatgcgatggccgagctgtgtctcgcg
cgcgaaacgggcgcgcgcaatgtcgatgcgtttctcaatcagcgcattctgccgtcgttg
tcgcgtgaactgctcgcgcgcatggcatgcgaaaccgcgcctgccaagatcctgctgacc
agctcgcccgaaggcaagttgacgatcgattttttcgatcgcgaacaagccgtcgccgac
cacgcggcgaacggctga

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