Paraburkholderia atlantica CCGE1002: BC1002_4680
Help
Entry
BC1002_4680 CDS
T01217
Name
(GenBank) porin
KO
K03285
general bacterial porin, GBP family
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
BC1002_4680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
Porin_1
DUF7155
Motif
Other DBs
NCBI-ProteinID:
ADG18646
UniProt:
D5WJK1
LinkDB
All DBs
Position
2:1607172..1608260
Genome browser
AA seq
362 aa
AA seq
DB search
MRKLLVSCAVAAAIAPVMAQAQTSVTLYGVADAFVGYFGNSEGQHVVSMNSGGAGGSRWG
IRAKEDLGGGLSAIAVLESGFNINNGTSGQSGRLFGRRAYVGIDSRDFGQIIAGRLQTAG
YEWGGTFDPMLLAAASPLGSIGGEEPRPWIFNMLQDPARQDNTIQYSSPTWHGLNGTAAY
SWGNNQGLQNATHYQLATLTYANGPLLTSYGFGHSLQPSATIARNTYEHVLGVRYDLSFV
ALYGSYQVRLNDPGRSDKGWQAGVTIPTSPFGTIRASYGGLSDQNITYLGTTGPQTGNWA
IRSAAIGYTYQLSKATMLYGFFKKLWNSGIAHQTIYPPGGLPAPTGNHANVTAIGLGLAT
RF
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtaaactgctcgttagctgcgccgttgcggcagcaatcgcgcctgtgatggcacag
gcacagaccagcgtgacgctgtatggcgttgccgatgcgttcgtcggctacttcggaaac
tccgaaggccaacacgtcgtcagcatgaacagcggcggcgccggtgggtcgcgttggggc
attcgcgcgaaggaagacctcggcggcggtttgtcagcgatcgccgtgctcgaaagcggc
ttcaacatcaacaacggtacgtccggccagagtggccgtttgttcggtcgtcgcgcctac
gttggcatcgacagtcgcgacttcggccagatcattgcaggtcgcctgcaaacggccggc
tacgagtggggcggcaccttcgacccgatgctgctggctgcagcgtcgccgctcggctcg
atcggtggcgaggaaccgcgtccatggattttcaacatgctgcaggatccggctcgccaa
gataatacgatccagtactcgtcgccgacgtggcatggtctgaacggcacggcggcctat
tcgtggggcaacaatcaaggtctgcagaacgcgacccactaccaactcgcgacgctcacc
tacgccaacggcccgttgctcacgagctacggcttcggccacagcctgcaaccgtcagcg
accattgcacgcaacacgtacgaacacgtgctgggtgtcagatacgacctcagctttgta
gcgctctacggttcgtaccaggtgcgtctgaacgatccgggccgtagcgataagggctgg
caagccggtgtcacgattccgaccagcccgttcggcaccattcgtgcttcttacggtgga
ctgagcgaccagaacattacctacctcggcacaaccggtccgcaaacgggtaactgggcg
attcgctcggctgctatcggttatacgtatcaactctcgaaggcgacgatgctgtacggc
ttcttcaagaagctctggaacagcggcatcgctcaccagacgatctacccgcccggtggg
ctcccggccccgactggcaaccacgccaacgtcacggcaatcggtctgggtctggcaacg
cgcttctaa
DBGET
integrated database retrieval system
