Paraburkholderia atlantica CCGE1002: BC1002_5025
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Entry
BC1002_5025 CDS
T01217
Name
(GenBank) transcriptional regulator, LysR family
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bge03000
]
BC1002_5025
Transcription factors [BR:
bge03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BC1002_5025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_50
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ADG18971
UniProt:
D5WE18
LinkDB
All DBs
Position
2:1970729..1971649
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AA seq
306 aa
AA seq
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MALTISQLRAFTAVAEHGSIRAASRALGIAQSGITQQLQNLESMLGATLFTRTNRGIALT
ALGQRLLQRAGAILGECERAEDDVRQLRGDYVGEVTFGMTTEPLVDAFAPVLMEFRARFG
RVAVHLRTGTSRMMISWIREGTLDFAVALVSKQTDTADLSVTPLYPSDPVIVCRRGHPKA
RAKSLAELFDCTWVTTRSPNLTEEPHVNRLSHLFDSHGLPPPKIVATVEGLYETLHLVGA
TDCLSLESSVITKRGPFADVLTTIPVRERALQQHVCLLQRAAIPLTPAAQEFATMIASYT
RTVRAR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcattgacgatttcgcagctgcgcgcgttcacggcggtcgccgagcatggcagcatc
cgcgccgcgtcgcgcgcgctcggcatcgcgcaaagcggcatcacgcagcagttgcagaac
ctcgaatcgatgctcggcgcgacgttgttcacgcgcacgaatcgcggcattgcgctgacc
gcgctgggccagcggctgctgcagcgggccggcgcgatcctcggtgaatgcgagcgtgcc
gaggatgacgtgcggcaactgcgcggcgactacgtcggcgaggtcacgttcggcatgacg
accgagccgctcgtcgacgcgttcgcgccggtgctgatggaatttcgtgcgcgcttcggg
cgcgtcgccgtgcatctgcgcaccggcacttcacgcatgatgatttcgtggatccgcgaa
ggcacgttggatttcgcggtcgcgctcgtctcgaagcagaccgataccgccgatctgtcg
gtcacaccgctgtatccgtccgatccggtgatcgtgtgccggcgcggtcatccgaaggcg
cgcgcgaagtcgctcgctgagctgttcgattgcacgtgggtgacgacgcgctcgccgaat
ctgaccgaggagccgcacgtcaaccgcttgagccatctgttcgacagccacgggttgccg
ccaccgaagatcgtcgcgaccgtcgagggcctttacgagacgctgcatctggtgggcgcg
acagattgcctgtcgctcgaatcgtcggtcatcacgaagcgtgggccgttcgcggacgtg
ctgacgacgattccggtgcgcgagcgcgctttgcagcagcacgtctgtctgctgcaacgc
gcggcgataccgctgacgccagccgcgcaggagttcgcgacgatgatcgcgtcgtacacg
cgcacggtgcgggcgcgttga
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integrated database retrieval system
