Paraburkholderia atlantica CCGE1002: BC1002_5256
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Entry
BC1002_5256 CDS
T01217
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_5256
Enzymes [BR:
bge01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BC1002_5256
DNA repair and recombination proteins [BR:
bge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BC1002_5256
Prokaryotic type
BC1002_5256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADG19194
UniProt:
D5WER9
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All DBs
Position
2:complement(2219551..2221050)
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AA seq
499 aa
AA seq
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MTRARHLHDSFDSGLVWFRRDLRNTDHAALYYALEHCERVWCVFVFDTTILQPIVDAWQT
RHPGEPVKDRRIDFILASLAELDDALRANGGGLVVLYGDPAELVPKLAAELRVDAVFANH
DYEPVAIERDATVGERLAEKGRQWLTFKDQTIFERDELLNGQDKPFAVFTPYKNAWLKQL
SAFDLKPYPVETYAKHLAALPPKLDRRLPTLDQLCFAPSNLTDLPLPAGMSGAQQLLDDF
LTRIDSYAERRDFPAAKGPSYLSVHLRFGTVSIRTLARLAYEMSLQPDGKGAATWLSELI
WRDFYFMVLAHHPRIAKGAPFKPEYEHLRWEKGPSADAAFAAWCDGRTGYPLVDAAMLQL
NHTGYMHNRLRMVTASFLAKDLGVDWRLGERYFADLLNDFDFSANNGGWQWAASTGCDAQ
PYFRIFNPVTQSEKFDPDGRFIKRYLPQLAQLPAKWIHAPWLAGAERLAEYGVVLGGNYP
EPIVDHAQARERTLIRYGK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgcccgccacctgcacgacagcttcgactccggcctcgtctggttccgccgc
gatctgcgcaacaccgatcatgccgcgctgtactacgcgctcgagcattgcgagcgcgtc
tggtgcgtgttcgtgttcgacacgacgatcctgcagccgatcgtcgatgcctggcagacc
cgtcacccgggcgagccggtaaaggatcgccgcatcgacttcattctcgcgtcgctggct
gaactcgacgacgcgctgcgcgcgaacggcggcggtctcgtcgtgctatacggcgatccg
gccgagctggtgccgaagctcgcggcggagctgcgcgtcgatgccgtgttcgcgaatcac
gactacgagccggttgcgatcgaacgcgacgcaacagtcggcgagcgtctcgcggaaaag
ggccggcagtggctaacgttcaaggaccagacgattttcgagcgcgacgagttgctgaac
ggccaggacaagccattcgcggtcttcacgccatataagaacgcgtggctcaagcaactg
agcgcgttcgacctgaagccttacccggtggagacctacgcgaagcatctggcggcgctg
ccgcccaagctcgaccgtcggttgcccacgctcgatcagctctgcttcgcgccgagcaac
ctgacggacttgccactgcccgccggcatgagcggtgcgcaacagttgctcgacgatttc
ctgacacgcatcgacagctacgcggagcggcgcgatttccccgccgcgaaaggaccgagc
tatctgtcggtgcatctgcgcttcggcacggtgtcgatccgcacgctcgcacggctcgcg
tatgagatgtcgctgcaaccggacggcaaaggcgcggcaacctggttgtcggaactgatc
tggcgggatttctatttcatggtcctggcgcaccacccgcgcatcgcgaaaggcgcgccg
ttcaaaccggaatacgagcatttgcgctgggaaaaaggtccctcggccgatgcggcgttc
gccgcctggtgcgacggccgcaccggctatccgctcgtcgatgccgcgatgctgcagttg
aaccacaccggctatatgcacaaccgtctgcgcatggtcacggcgagcttcctcgcgaag
gatctcggcgtcgactggcggctcggcgagcgatacttcgccgatctgctgaacgacttc
gatttctcggcgaacaacggcggctggcagtgggccgcgtcgaccggctgtgacgcgcag
ccttacttccgtatattcaatccggtcacgcaatccgaaaaattcgaccccgacggacgc
tttatcaaacgatatctaccgcagctcgcgcagttgccggcaaaatggattcacgcgcca
tggctggcgggcgcggagcggctcgcggaatacggcgtggtgctaggcgggaattatccc
gaaccgatcgtcgatcacgcacaggctcgcgagcgcacactgatccgatacggaaagtga
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