Paraburkholderia atlantica CCGE1002: BC1002_5265
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Entry
BC1002_5265 CDS
T01217
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03030
DNA replication
bge03410
Base excision repair
bge03420
Nucleotide excision repair
bge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BC1002_5265
03410 Base excision repair
BC1002_5265
03420 Nucleotide excision repair
BC1002_5265
03440 Homologous recombination
BC1002_5265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bge03032
]
BC1002_5265
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_5265
Enzymes [BR:
bge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BC1002_5265
DNA replication proteins [BR:
bge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BC1002_5265
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BC1002_5265
NER (nucleotide excision repair)
GGR (global genome repair) factors
BC1002_5265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ADG19203
UniProt:
D5WES8
LinkDB
All DBs
Position
2:2227715..2230456
Genome browser
AA seq
913 aa
AA seq
DB search
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPEGGPTGALYGMINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYPEYKANRPSMPEDLARQIEPIHVAVRALGWPLLMIDRVEADDV
IGTLCTEAEKLGMNVVVSTGDKDLAQLVSNRVTLVNTMTNETLDRDGVVAKFGVPPERII
DYLSLIGDTVDNVPGVEKCGPKTAVKWLMQYESLDGIVEHASEIKGAVGDNLRRALDFLP
MARKLVTVERHCDLTGHIVSIEESLPSLPESREELRDLFTRHGFKTWLREVEIADAVEGP
ETDVPPALSVDHERHYETVQTWEQLDAWLDKINAAELTSFDSETTSLDPMVAQIVGLSLS
VEAGRAAYVPLAHRGPDAPVQLPRDEVLAKLKPWLESADHKKVGQHLKYDEQVLANYGIE
MRGVEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAQQIGFDEVALDKAA
EYAAEDADITLRLHQALYPQIAVENSLDHVYREIEVPTSRVLRKMERTGVLIDAEKLRQQ
SGEIATRLIELEGSAYELAGGEFNLGSPKQIGQIFFEKLELPVIKKTPSGAPSTDEEVLQ
KLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNPRTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDESLMRAFSQGEDIHR
ATASEIFNVTPLEVSSDQRRVAKVINFGLIYGMSAFGLASNLGITRDAAKMYIDRYFARY
PGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKMSMIAVQNWIEDSKIGTRMIMQVHDELILEVPDAELSEVRKRLPELMCGVAALKVPLV
AEVGAGLNWEEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaagccttgaaggtaagaccctgctgttggtcgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctacgcggccccgagggtggcccgacgggt
gcgctctatgggatgatcaacatgctgcggcgcatgcgcaaggaagtcacagcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgtttcgcgacgattggtatccggagtac
aaggcgaaccgtccatcgatgccggaagatcttgcccgtcagatcgagccgattcacgtc
gcggtgcgcgcgctcggctggccgctgcttatgatcgatcgcgtcgaagcggacgacgtg
atcggcacgctgtgtaccgaggcagaaaagctcggcatgaacgtggtcgtatcgaccggc
gacaaggacctcgcgcagctcgtgtcgaaccgcgtcacgctcgtcaatacgatgaccaac
gaaactctcgaccgcgacggcgtggtcgcgaagttcggcgtgccgccggagcgcatcatc
gattacctgtcgctgatcggcgataccgtcgacaacgtgccgggcgtcgagaaatgcggt
ccgaaaacagcggtcaaatggctgatgcaatatgagtcgctagatggcatcgtcgagcat
gcgagcgagatcaagggcgcggtcggcgacaacctgcgccgcgcgctggacttcttgccg
atggcgcgcaagctcgtcacagtcgagcgtcattgcgatctgaccgggcacatcgtatcg
atcgaagaaagcttgccgagccttcccgagtcgcgcgaagagttgcgagatttgttcacg
cgccacggcttcaagacgtggctgcgcgaagtcgaaattgccgatgcggtcgaaggtccg
gaaaccgacgtgccacccgcgctgtccgtcgatcacgagcgccactacgagaccgtgcaa
acatgggagcagctcgacgcgtggctcgacaagatcaatgcggccgagctgacctcgttc
gattccgaaaccacgtcgctcgatccgatggtcgcgcagatcgtcggcttgtcgctgtcg
gtcgaagcgggccgtgccgcgtatgtgccgctcgcgcatcgcggccccgacgcgccggtg
caactgccgcgcgacgaagtgctcgcgaagctcaagccttggctcgaaagcgcggaccac
aagaaggtcggccagcatctgaagtacgacgaacaggtgctcgcgaattacggcatcgaa
atgcgcggcgtcgagcatgacacgctgctcgaatcgtatgtgctcgaatcgcatcgcacg
cacgacatggacagcctcgcgctgcgtcatctcggcgtgaagacgatcaagtatgaagac
gtcgcgggcaagggcgcgcagcagatcggcttcgacgaagtcgcgctcgacaaagccgcc
gaatatgcggccgaagacgcagacatcacgctgcgtttgcatcaggccttgtatccgcag
atcgccgtggagaattcgctcgatcacgtctatcgcgagatcgaagtgccgacttcgcgc
gtactgcgcaagatggagcgcactggcgtgctgatcgacgctgagaagttgcgtcagcag
agcggcgaaatcgccacccgtctgatcgagctcgaaggcagcgcgtacgaactggccggc
ggcgaattcaacctcggctcgccgaagcagatcgggcagattttcttcgagaagctcgaa
ctgccggtcatcaagaagacgccgagcggcgcgccgtccaccgacgaagaggtgctgcag
aagctcgccgaagactacccgctgccgaagatcctgctcgagcatcgcggcctgtcgaaa
ctgaagtcgacctataccgacaagctgccgcgcatggtcaatccgcgaaccggccgcgtg
catacgaactacgcgcaggcggtggcggtgacggggcgcctcgcgtccaacgatccgaac
ctgcagaacatcccggtgcgtaccggcgaaggccggcgtatccgcgaagcgttcatcgcg
ccaccgggtcacaaactcgtgtccgccgattactcgcagatcgaattgcgcatcatggcg
cacatatccggcgacgaatcgctgatgcgtgcgttttcgcagggcgaggatattcaccgc
gccactgcatcggaaatcttcaacgtgacgccgctcgaagtgtcgagcgatcagcgacgc
gtcgcgaaggtcatcaacttcggtctcatctacggcatgagcgccttcggcctcgcgtcg
aatctcggcatcacgcgcgatgccgcgaagatgtatatcgaccgctacttcgcgcgctat
cccggtgtcgctcgctatatggacgagacgcgcttgagcgcgaaggcgaagggctacgtc
gaaacggtgttcggccgccgtctgtggctgcccgagatcaacggcggcaacggtccgcgc
cgccaggccgcagagcgggccgcgatcaacgcaccgatgcagggcaccgcggccgacctg
atcaagatgtcgatgatcgccgtgcagaactggatcgaagactcgaagatcggcacgcgc
atgatcatgcaggtacacgacgaactgattctcgaagtgcctgacgctgagctgtccgaa
gtccgcaagcgcctgccggaactgatgtgcggcgtcgccgcgctgaaggtgccgctggtc
gccgaagtcggcgcggggctgaactgggaggaggcgcattga
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