Paraburkholderia atlantica CCGE1002: BC1002_5270
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Entry
BC1002_5270 CDS
T01217
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BC1002_5270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bge03400
]
BC1002_5270
Enzymes [BR:
bge01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BC1002_5270
DNA repair and recombination proteins [BR:
bge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BC1002_5270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
ADG19208
UniProt:
D5WET3
LinkDB
All DBs
Position
2:2235495..2235803
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AA seq
102 aa
AA seq
DB search
MAKTASNDSAAAPAESGDSAPLPENYEAAQAELEELVARMEGGSLSLEESLAAYRRGAAL
VAFCQQQLEKVEQQVRVLDGETLKPLPMNTAGTAATESGDDL
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaccgcatcgaacgattccgccgccgcgccagccgaaagcggcgatagcgcg
cccctgccggagaattacgaggccgcgcaggcagagctggaagagctcgtcgcgcgcatg
gaaggcggcagcctgagcctcgaggaatcgctggccgcgtaccgtcgcggggcggcactt
gtcgcattctgtcaacagcagctcgaaaaggtcgagcagcaggtgcgggttctcgatggc
gagaccctcaagccactgcccatgaataccgcaggcacagccgcgactgagagcggggac
gacctatga
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